Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | E3S84_RS02345 | Genome accession | NZ_CP047841 |
| Coordinates | 443112..444086 (+) | Length | 324 a.a. |
| NCBI ID | WP_001633882.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain UP_644 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 438112..449086
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3S84_RS02310 (E3S84_02310) | rpmG | 438572..438721 (+) | 150 | WP_001265709.1 | 50S ribosomal protein L33 | - |
| E3S84_RS02315 (E3S84_02315) | - | 438930..439469 (+) | 540 | WP_000164546.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| E3S84_RS02320 (E3S84_02320) | - | 439481..440944 (+) | 1464 | WP_001017858.1 | rhomboid family protein | - |
| E3S84_RS02325 (E3S84_02325) | - | 440925..441128 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| E3S84_RS02330 (E3S84_02330) | - | 441125..442111 (+) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| E3S84_RS02335 (E3S84_02335) | - | 442111..442440 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| E3S84_RS02340 (E3S84_02340) | - | 442437..443060 (+) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| E3S84_RS02345 (E3S84_02345) | comGA | 443112..444086 (+) | 975 | WP_001633882.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| E3S84_RS02350 (E3S84_02350) | comGB | 444058..445128 (+) | 1071 | WP_000776422.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| E3S84_RS02355 (E3S84_02355) | comGC | 445142..445453 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| E3S84_RS02360 (E3S84_02360) | comGD | 445431..445877 (+) | 447 | WP_001788899.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| E3S84_RS02365 (E3S84_02365) | comGE | 445864..446163 (+) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| E3S84_RS02370 (E3S84_02370) | comGF | 446081..446578 (+) | 498 | WP_029694050.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| E3S84_RS02375 (E3S84_02375) | - | 446675..446821 (+) | 147 | WP_001792109.1 | hypothetical protein | - |
| E3S84_RS02380 (E3S84_02380) | - | 446811..447335 (+) | 525 | WP_001015120.1 | shikimate kinase | - |
| E3S84_RS02385 (E3S84_02385) | gcvT | 447494..448585 (+) | 1092 | WP_000093348.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36898.90 Da Isoelectric Point: 8.4460
>NTDB_id=417589 E3S84_RS02345 WP_001633882.1 443112..444086(+) (comGA) [Staphylococcus aureus strain UP_644]
MKILFQEIINKAIEMKASDVHFIPVKNEVSIKFRINDNLEQYEQIGNSIYQKLLVYMKFQAGLDVSTQQVAQSGRYSYHF
NKIYFLRISTLPLSLGQESCVIRIVPQFFQQQKSTYKFNDFKHLMNKKQGLLLFSGPTGSGKSTLMYQMVSYANKALNLN
VISIEDPVEMQIPGIVQINVNDKAGINYVNSFKAILRCDPDVILIGEIRDKDVAKCVIQASLSGHLVLTTLHATDCKGAI
LRLLEMGISVQELIQATNLIINQRLVTTIKQQRQLVCEILSQQQLRYFFSHNHSLPSSFENLEDKLDDMTKAGVICETTM
DKYI
MKILFQEIINKAIEMKASDVHFIPVKNEVSIKFRINDNLEQYEQIGNSIYQKLLVYMKFQAGLDVSTQQVAQSGRYSYHF
NKIYFLRISTLPLSLGQESCVIRIVPQFFQQQKSTYKFNDFKHLMNKKQGLLLFSGPTGSGKSTLMYQMVSYANKALNLN
VISIEDPVEMQIPGIVQINVNDKAGINYVNSFKAILRCDPDVILIGEIRDKDVAKCVIQASLSGHLVLTTLHATDCKGAI
LRLLEMGISVQELIQATNLIINQRLVTTIKQQRQLVCEILSQQQLRYFFSHNHSLPSSFENLEDKLDDMTKAGVICETTM
DKYI
Nucleotide
Download Length: 975 bp
>NTDB_id=417589 E3S84_RS02345 WP_001633882.1 443112..444086(+) (comGA) [Staphylococcus aureus strain UP_644]
TTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATGTACATTTTATTCCAGTTAAAAA
TGAAGTAAGTATTAAATTTAGAATTAATGATAACTTGGAGCAGTATGAACAAATTGGGAATAGCATTTATCAAAAGTTAT
TAGTTTATATGAAGTTTCAAGCTGGGCTTGATGTTTCTACACAGCAAGTCGCACAGAGCGGTCGATATAGTTACCATTTC
AATAAAATATATTTTTTGAGAATATCAACTTTACCATTGTCACTTGGCCAAGAAAGTTGTGTTATCAGAATTGTACCTCA
ATTTTTTCAACAACAGAAATCAACTTATAAATTCAATGATTTTAAACACCTCATGAATAAGAAACAAGGATTACTATTGT
TTAGTGGGCCAACTGGTTCAGGAAAGAGTACATTAATGTATCAAATGGTCTCATACGCGAATAAAGCCTTGAATTTAAAT
GTAATTTCTATAGAGGATCCTGTAGAGATGCAAATTCCTGGTATCGTCCAAATTAATGTGAATGATAAAGCTGGCATTAA
CTATGTAAATTCGTTTAAAGCTATTTTAAGATGTGATCCTGATGTTATTTTAATAGGTGAAATCAGAGATAAAGATGTTG
CCAAGTGTGTTATACAGGCTAGTTTAAGTGGTCACCTTGTTCTGACTACATTGCATGCAACTGATTGTAAAGGTGCTATT
TTAAGGCTATTAGAAATGGGCATTTCTGTACAAGAATTGATACAGGCAACTAACTTAATTATAAACCAACGACTTGTAAC
TACTATTAAGCAACAGCGACAATTAGTATGTGAAATTCTATCTCAGCAACAACTCCGATATTTCTTTTCCCATAATCATT
CATTACCATCATCATTTGAGAACTTAGAAGATAAACTTGATGATATGACAAAAGCAGGTGTCATTTGTGAAACTACAATG
GATAAATACATTTAA
TTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATGTACATTTTATTCCAGTTAAAAA
TGAAGTAAGTATTAAATTTAGAATTAATGATAACTTGGAGCAGTATGAACAAATTGGGAATAGCATTTATCAAAAGTTAT
TAGTTTATATGAAGTTTCAAGCTGGGCTTGATGTTTCTACACAGCAAGTCGCACAGAGCGGTCGATATAGTTACCATTTC
AATAAAATATATTTTTTGAGAATATCAACTTTACCATTGTCACTTGGCCAAGAAAGTTGTGTTATCAGAATTGTACCTCA
ATTTTTTCAACAACAGAAATCAACTTATAAATTCAATGATTTTAAACACCTCATGAATAAGAAACAAGGATTACTATTGT
TTAGTGGGCCAACTGGTTCAGGAAAGAGTACATTAATGTATCAAATGGTCTCATACGCGAATAAAGCCTTGAATTTAAAT
GTAATTTCTATAGAGGATCCTGTAGAGATGCAAATTCCTGGTATCGTCCAAATTAATGTGAATGATAAAGCTGGCATTAA
CTATGTAAATTCGTTTAAAGCTATTTTAAGATGTGATCCTGATGTTATTTTAATAGGTGAAATCAGAGATAAAGATGTTG
CCAAGTGTGTTATACAGGCTAGTTTAAGTGGTCACCTTGTTCTGACTACATTGCATGCAACTGATTGTAAAGGTGCTATT
TTAAGGCTATTAGAAATGGGCATTTCTGTACAAGAATTGATACAGGCAACTAACTTAATTATAAACCAACGACTTGTAAC
TACTATTAAGCAACAGCGACAATTAGTATGTGAAATTCTATCTCAGCAACAACTCCGATATTTCTTTTCCCATAATCATT
CATTACCATCATCATTTGAGAACTTAGAAGATAAACTTGATGATATGACAAAAGCAGGTGTCATTTGTGAAACTACAATG
GATAAATACATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
99.691 |
100 |
0.997 |
| comGA | Staphylococcus aureus N315 |
99.691 |
100 |
0.997 |