Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | E3S85_RS13200 | Genome accession | NZ_CP047839 |
| Coordinates | 2691923..2692318 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932696.1 | Uniprot ID | A0A166JXQ7 |
| Organism | Staphylococcus aureus strain UP_678 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2686923..2697318
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3S85_RS13170 (E3S85_13170) | - | 2687866..2688270 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| E3S85_RS13180 (E3S85_13180) | - | 2689149..2689382 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| E3S85_RS13185 (E3S85_13185) | murA | 2689493..2690758 (+) | 1266 | WP_000358009.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| E3S85_RS13190 (E3S85_13190) | fabZ | 2690792..2691232 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| E3S85_RS13195 (E3S85_13195) | - | 2691289..2691729 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| E3S85_RS13200 (E3S85_13200) | ssb | 2691923..2692318 (+) | 396 | WP_000932696.1 | single-stranded DNA-binding protein | Machinery gene |
| E3S85_RS13205 (E3S85_13205) | sceD | 2692707..2693402 (+) | 696 | WP_000752015.1 | lytic transglycosylase SceD | - |
| E3S85_RS13210 (E3S85_13210) | tenA | 2693927..2694616 (+) | 690 | WP_160176114.1 | thiaminase II | - |
| E3S85_RS13215 (E3S85_13215) | thiD | 2694609..2695439 (+) | 831 | WP_000594963.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| E3S85_RS13220 (E3S85_13220) | thiM | 2695423..2696214 (+) | 792 | WP_001108496.1 | hydroxyethylthiazole kinase | - |
| E3S85_RS13225 (E3S85_13225) | thiE | 2696216..2696857 (+) | 642 | WP_000483150.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15070.11 Da Isoelectric Point: 5.6824
>NTDB_id=417574 E3S85_RS13200 WP_000932696.1 2691923..2692318(+) (ssb) [Staphylococcus aureus strain UP_678]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIERYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIERYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=417574 E3S85_RS13200 WP_000932696.1 2691923..2692318(+) (ssb) [Staphylococcus aureus strain UP_678]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAGATACACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAGATACACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
99.237 |
100 |
0.992 |
| ssb | Staphylococcus aureus MW2 |
98.473 |
100 |
0.985 |