Detailed information NTG0041752

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: PSTAB_RS13015
• Genome accession: NC_015740
• Coordinates: 2811590..2813815 (-)
• Length: 741 a.a.
• NCBI ID: WP_013983261.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2806590..2818815

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PSTAB_RS12980 (PSTAB_2613)	murB	2806980..2807999 (-)	1020	WP_013983255.1	UDP-N-acetylmuramate dehydrogenase	-
PSTAB_RS12985 (PSTAB_2614)	-	2807996..2808463 (-)	468	WP_013983256.1	low molecular weight protein-tyrosine-phosphatase	-
PSTAB_RS12990 (PSTAB_2615)	kdsB	2808465..2809229 (-)	765	WP_013983257.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
PSTAB_RS12995 (PSTAB_2616)	-	2809226..2809411 (-)	186	WP_011913743.1	Trm112 family protein	-
PSTAB_RS13000 (PSTAB_2617)	lpxK	2809457..2810461 (-)	1005	WP_013983258.1	tetraacyldisaccharide 4'-kinase	-
PSTAB_RS13005 (PSTAB_2618)	-	2810461..2810889 (-)	429	WP_013983259.1	ExbD/TolR family protein	-
PSTAB_RS13010 (PSTAB_2619)	-	2810886..2811518 (-)	633	WP_013983260.1	MotA/TolQ/ExbB proton channel family protein	-
PSTAB_RS13015 (PSTAB_2620)	comA	2811590..2813815 (-)	2226	WP_013983261.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
PSTAB_RS13020 (PSTAB_2621)	-	2813961..2814476 (+)	516	WP_011913748.1	DUF2062 domain-containing protein	-
PSTAB_RS13025 (PSTAB_2622)	-	2814489..2815733 (-)	1245	WP_026012454.1	lipoprotein-releasing ABC transporter permease subunit	-
PSTAB_RS13030 (PSTAB_2623)	lolD	2815733..2816431 (-)	699	WP_013983263.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
PSTAB_RS13035 (PSTAB_2624)	-	2816439..2817686 (-)	1248	WP_041771782.1	lipoprotein-releasing ABC transporter permease subunit	-
PSTAB_RS13040 (PSTAB_2625)	-	2817719..2818354 (+)	636	WP_013983265.1	PilZ domain-containing protein	-
PSTAB_RS13045 (PSTAB_2626)	-	2818358..2818666 (+)	309	WP_011913753.1	hypothetical protein	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 80961.55 Da
• Isoelectric Point: 10.2466

>NTDB_id=41752 PSTAB_RS13015 WP_013983261.1 2811590..2813815(-) (comA) [Stutzerimonas stutzeri]
MRTWMLALAAGLVLPRFLPALPAQWFCAALAAVGLLLLLRHRWVAPGFFLLGLSWACYQSQSAIDDRLPASMDGRTFWIE
GRVVGLPSRIGNVVRFELDDIQSRHAGLPSKVRLSWYDGPLLQAGERWRLAARLKRPHGMVNPHAFDYEAWLLARRIGAA
GTIKAGERLTASAASDGWRDQLRARLMAVPASDRQGAIAALVVGDDSGLSRGDWQVLQDTGTVHLMVISGQHIGMLAGLL
YGLVALLARLGAWPRRLPWLPWACGLALSGALAYGWLAGFDVPVRRACLMVTVVLVWRLRFRHLGVWLPLLLALDGVLLF
DPLVTLQPGFWLSFGAVAVLALAFSGRLGSWRWWMALTRAQWAATLGLLPLLLALGLPVSASGPLANLLAVPWVSLTVPF
ALLGTLLLPLAGVGEALLSVVGYSLALLFDVLAAIANWQPAWIAVGLPVWALALIGLGVLLLLLPAGIPLRSLGLLLLLP
LAFPPRVEVPDGRAQVWVLDVGQGLAVLVRTREHALLYDAGPKQGDFDTGERVVVPSLRTLGVTRLDLLLLSHADNDHSG
GADAVQRLLRVDRVVSGEPSRLAPDLGAERCESGSSWQWNDVRFSLWQWQMARDSNQHSCVLQIEANGERILLTGDIDQA
AERAWLASGQRTPSHWLLLPHHGSRSSSSEPFLRGVASHAALISRSLHNAFGHPHPSVVERLEILDIRAYDTALHGAIRI
ELGSFSPPRLQRSQRRFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=41752 PSTAB_RS13015 WP_013983261.1 2811590..2813815(-) (comA) [Stutzerimonas stutzeri]
ATGCGCACATGGATGCTTGCGCTCGCCGCGGGTCTGGTCCTGCCACGCTTCCTTCCTGCCTTGCCCGCGCAGTGGTTCTG
TGCGGCGCTGGCGGCTGTCGGACTGCTGCTCCTGCTGCGTCACCGCTGGGTGGCGCCGGGCTTTTTTCTGCTGGGTTTGA
GCTGGGCCTGCTACCAGAGCCAGAGCGCCATCGACGACCGCTTACCGGCGTCCATGGACGGTCGTACGTTTTGGATCGAG
GGACGGGTAGTGGGGTTGCCCAGCCGTATCGGCAATGTGGTGCGCTTCGAGCTCGACGACATCCAATCGCGCCATGCCGG
GTTGCCATCGAAGGTGCGGCTGTCCTGGTATGACGGTCCGCTGCTGCAAGCCGGCGAGCGCTGGCGCCTGGCGGCGCGAC
TGAAGCGACCGCATGGCATGGTCAATCCCCACGCCTTCGATTACGAAGCCTGGTTGCTGGCGCGACGCATCGGCGCCGCG
GGCACGATAAAGGCGGGCGAGCGCCTGACGGCGTCGGCGGCAAGCGACGGATGGCGCGATCAGCTTCGGGCGCGGCTCAT
GGCCGTTCCGGCATCCGATCGGCAGGGCGCCATCGCGGCACTGGTGGTGGGTGACGATTCCGGTTTGAGCCGCGGCGACT
GGCAGGTGTTGCAGGACACCGGCACCGTCCACCTGATGGTCATCTCCGGACAGCACATCGGCATGCTGGCGGGGCTGCTC
TATGGTCTGGTCGCATTGCTGGCTCGCCTGGGTGCGTGGCCGCGGCGGTTGCCCTGGTTGCCCTGGGCGTGCGGGCTGGC
GTTAAGCGGTGCGCTGGCCTATGGCTGGCTGGCCGGTTTCGATGTACCGGTGCGTCGTGCCTGCCTGATGGTGACGGTGG
TGCTTGTCTGGCGATTGCGCTTTCGCCATCTGGGTGTCTGGTTGCCGCTGCTGCTGGCGCTCGATGGTGTCCTGCTGTTC
GATCCCCTGGTCACATTGCAGCCGGGGTTCTGGCTGTCGTTTGGAGCGGTGGCGGTTCTGGCATTGGCGTTCTCGGGGCG
GCTCGGCTCATGGCGCTGGTGGATGGCCCTGACCCGGGCGCAGTGGGCGGCCACCCTTGGTCTGCTTCCGCTGTTGCTGG
CCCTCGGATTGCCGGTAAGTGCGAGCGGGCCGCTGGCCAATCTGCTTGCCGTACCCTGGGTGAGTCTGACCGTGCCCTTT
GCGTTGCTCGGTACGCTCCTGCTGCCCCTGGCCGGGGTTGGCGAAGCGCTGCTGTCGGTGGTCGGCTATTCGCTGGCATT
GCTGTTCGACGTCCTGGCGGCGATAGCCAATTGGCAACCCGCCTGGATTGCGGTCGGCCTGCCCGTCTGGGCGCTGGCGT
TAATCGGGCTGGGCGTCCTGTTGCTGTTGCTGCCCGCGGGTATTCCGCTGCGTTCGCTGGGTTTGCTGCTGCTGTTGCCG
CTGGCGTTCCCGCCTCGTGTCGAGGTGCCAGACGGCCGGGCGCAGGTCTGGGTATTGGATGTGGGGCAGGGCCTGGCGGT
GCTTGTACGCACCCGCGAGCATGCACTGCTCTACGATGCCGGGCCGAAGCAGGGCGACTTCGATACGGGCGAGCGGGTGG
TCGTCCCTTCGCTCCGGACCCTTGGCGTGACTCGGTTGGATCTGCTGTTGCTGAGTCATGCCGATAATGATCATTCGGGC
GGTGCGGACGCGGTTCAGCGGTTGCTGAGGGTTGATCGGGTGGTCAGTGGCGAGCCGTCGCGCCTTGCGCCTGATCTGGG
CGCCGAACGTTGCGAAAGCGGTAGCAGCTGGCAGTGGAACGATGTGCGCTTCAGTCTGTGGCAATGGCAGATGGCACGCG
ACAGCAATCAGCACTCCTGCGTGCTGCAAATCGAGGCCAATGGTGAGCGGATCCTGCTCACCGGCGACATCGACCAGGCC
GCGGAGCGGGCATGGCTGGCAAGCGGACAGCGCACCCCATCGCACTGGCTGTTGCTGCCCCACCATGGCAGCCGCAGCTC
GTCGTCAGAACCGTTTCTGCGCGGCGTCGCCTCCCATGCCGCGCTGATCTCGCGCAGCCTGCACAATGCCTTCGGACACC
CACACCCAAGCGTGGTCGAGCGGCTCGAGATCCTCGATATCCGGGCCTACGACACCGCCTTGCATGGCGCAATCCGCATA
GAGCTGGGAAGCTTTTCGCCTCCTCGGCTACAACGTTCGCAGCGACGATTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (500-674)

• Competence protein (Competence) (201-464)

• Domain of unknown function (DUF4131) (DUF4131) (23-168)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	67.367	96.356	0.649
comA	Ralstonia pseudosolanacearum GMI1000	36.889	100	0.387