Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | E3S91_RS13130 | Genome accession | NZ_CP047835 |
| Coordinates | 2670035..2670430 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain UP_883 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2665035..2675430
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3S91_RS13100 (E3S91_13100) | - | 2666295..2666699 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| E3S91_RS13105 (E3S91_13105) | - | 2667035..2667127 (+) | 93 | WP_031824610.1 | hypothetical protein | - |
| E3S91_RS13110 (E3S91_13110) | - | 2667259..2667492 (+) | 234 | WP_000384524.1 | DUF1146 family protein | - |
| E3S91_RS13115 (E3S91_13115) | murA | 2667603..2668868 (+) | 1266 | WP_160193115.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| E3S91_RS13120 (E3S91_13120) | fabZ | 2668902..2669342 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| E3S91_RS13125 (E3S91_13125) | - | 2669401..2669841 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| E3S91_RS13130 (E3S91_13130) | ssb | 2670035..2670430 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| E3S91_RS13135 (E3S91_13135) | sceD | 2670819..2671514 (+) | 696 | WP_000752001.1 | lytic transglycosylase SceD | - |
| E3S91_RS13140 (E3S91_13140) | tenA | 2671900..2672589 (+) | 690 | WP_000396067.1 | thiaminase II | - |
| E3S91_RS13145 (E3S91_13145) | thiD | 2672582..2673412 (+) | 831 | WP_000594967.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| E3S91_RS13150 (E3S91_13150) | thiM | 2673396..2674187 (+) | 792 | WP_001108489.1 | hydroxyethylthiazole kinase | - |
| E3S91_RS13155 (E3S91_13155) | thiE | 2674189..2674830 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=417490 E3S91_RS13130 WP_000932694.1 2670035..2670430(+) (ssb) [Staphylococcus aureus strain UP_883]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=417490 E3S91_RS13130 WP_000932694.1 2670035..2670430(+) (ssb) [Staphylococcus aureus strain UP_883]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |