Detailed information NTG0417339

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: H9207_RS00875
• Genome accession: NZ_CP060892
• Coordinates: 182658..183641 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain EC22
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 177658..188641

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H9207_RS00860 (H9207_00840)	dppA	178801..180408 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
H9207_RS25175	-	180442..180552 (-)	111	Protein_170	hypothetical protein	-
H9207_RS00865 (H9207_00845)	dppB	180716..181735 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
H9207_RS00870 (H9207_00850)	dppC	181745..182647 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
H9207_RS00875 (H9207_00855)	amiE	182658..183641 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
H9207_RS00880 (H9207_00860)	amiE	183638..184642 (+)	1005	WP_039023208.1	dipeptide ABC transporter ATP-binding subunit DppF	Regulator
H9207_RS00885 (H9207_00865)	yhjV	184672..185943 (-)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
H9207_RS00890 (H9207_00870)	ldrD	186419..186526 (+)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
H9207_RS00895 (H9207_00875)	bcsG	186613..188292 (-)	1680	WP_000191619.1	cellulose biosynthesis protein BcsG	-
H9207_RS00900 (H9207_00880)	bcsF	188289..188480 (-)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=417339 H9207_RS00875 WP_001196486.1 182658..183641(+) (amiE) [Escherichia coli strain EC22]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=417339 H9207_RS00875 WP_001196486.1 182658..183641(+) (amiE) [Escherichia coli strain EC22]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404