Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | E3T01_RS12955 | Genome accession | NZ_CP047826 |
| Coordinates | 2639911..2640306 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain UP_1239 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2634911..2645306
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3T01_RS12925 (E3T01_12925) | - | 2636170..2636574 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| E3T01_RS12930 (E3T01_12930) | - | 2636910..2637002 (+) | 93 | WP_001790611.1 | hypothetical protein | - |
| E3T01_RS12935 (E3T01_12935) | - | 2637134..2637367 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| E3T01_RS12940 (E3T01_12940) | murA | 2637478..2638743 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| E3T01_RS12945 (E3T01_12945) | fabZ | 2638777..2639217 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| E3T01_RS12950 (E3T01_12950) | - | 2639277..2639717 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| E3T01_RS12955 (E3T01_12955) | ssb | 2639911..2640306 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| E3T01_RS12960 (E3T01_12960) | sceD | 2640695..2641390 (+) | 696 | WP_000752005.1 | lytic transglycosylase SceD | - |
| E3T01_RS12965 (E3T01_12965) | tenA | 2641914..2642603 (+) | 690 | WP_000396072.1 | thiaminase II | - |
| E3T01_RS12970 (E3T01_12970) | thiD | 2642596..2643426 (+) | 831 | WP_000594942.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| E3T01_RS12975 (E3T01_12975) | thiM | 2643410..2644201 (+) | 792 | WP_001108482.1 | hydroxyethylthiazole kinase | - |
| E3T01_RS12980 (E3T01_12980) | thiE | 2644203..2644844 (+) | 642 | WP_000483164.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=417324 E3T01_RS12955 WP_000932694.1 2639911..2640306(+) (ssb) [Staphylococcus aureus strain UP_1239]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=417324 E3T01_RS12955 WP_000932694.1 2639911..2640306(+) (ssb) [Staphylococcus aureus strain UP_1239]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |