Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | E3T02_RS13410 | Genome accession | NZ_CP047822 |
| Coordinates | 2710048..2710410 (+) | Length | 120 a.a. |
| NCBI ID | WP_154459863.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain UP_1278 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2705048..2715410
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3T02_RS13380 (E3T02_13380) | - | 2706309..2706713 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| E3T02_RS13385 (E3T02_13385) | - | 2707049..2707141 (+) | 93 | WP_031929694.1 | hypothetical protein | - |
| E3T02_RS13390 (E3T02_13390) | - | 2707273..2707506 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| E3T02_RS13395 (E3T02_13395) | murA | 2707617..2708882 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| E3T02_RS13400 (E3T02_13400) | fabZ | 2708916..2709356 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| E3T02_RS13405 (E3T02_13405) | - | 2709414..2709854 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| E3T02_RS13410 (E3T02_13410) | ssb | 2710048..2710410 (+) | 363 | WP_154459863.1 | single-stranded DNA-binding protein | Machinery gene |
| E3T02_RS13415 (E3T02_13415) | sceD | 2710832..2711527 (+) | 696 | WP_000752001.1 | lytic transglycosylase SceD | - |
| E3T02_RS13420 (E3T02_13420) | tenA | 2712051..2712740 (+) | 690 | WP_045173472.1 | thiaminase II | - |
| E3T02_RS13425 (E3T02_13425) | thiD | 2712733..2713563 (+) | 831 | WP_000594960.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| E3T02_RS13430 (E3T02_13430) | thiM | 2713547..2714338 (+) | 792 | WP_045173475.1 | hydroxyethylthiazole kinase | - |
| E3T02_RS13435 (E3T02_13435) | thiE | 2714340..2714981 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 120 a.a. Molecular weight: 13736.68 Da Isoelectric Point: 7.1056
>NTDB_id=417282 E3T02_RS13410 WP_154459863.1 2710048..2710410(+) (ssb) [Staphylococcus aureus strain UP_1278]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDS
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDS
Nucleotide
Download Length: 363 bp
>NTDB_id=417282 E3T02_RS13410 WP_154459863.1 2710048..2710410(+) (ssb) [Staphylococcus aureus strain UP_1278]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.167 |
100 |
0.992 |