Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   E3T02_RS05745 Genome accession   NZ_CP047822
Coordinates   1134420..1135406 (-) Length   328 a.a.
NCBI ID   WP_160194397.1    Uniprot ID   -
Organism   Staphylococcus aureus strain UP_1278     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 1129420..1140406
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E3T02_RS05720 (E3T02_05720) - 1129680..1130027 (-) 348 WP_001242102.1 hypothetical protein -
  E3T02_RS05725 (E3T02_05725) - 1130213..1130806 (+) 594 WP_045172683.1 CYTH domain-containing protein -
  E3T02_RS05730 (E3T02_05730) - 1130910..1131275 (+) 366 WP_000214070.1 truncated hemoglobin YjbI -
  E3T02_RS05735 (E3T02_05735) yjbH 1131298..1132104 (+) 807 WP_000896697.1 protease adaptor protein YjbH -
  E3T02_RS05740 (E3T02_05740) pepF 1132564..1134372 (-) 1809 WP_000082725.1 oligoendopeptidase F -
  E3T02_RS05745 (E3T02_05745) coiA 1134420..1135406 (-) 987 WP_160194397.1 competence protein CoiA Machinery gene
  E3T02_RS05750 (E3T02_05750) mecA 1135527..1136246 (-) 720 WP_001217728.1 adaptor protein MecA -
  E3T02_RS05755 (E3T02_05755) spxA 1136617..1137012 (-) 396 WP_000258003.1 transcriptional regulator SpxA -
  E3T02_RS05760 (E3T02_05760) trpS 1137307..1138296 (+) 990 WP_000448934.1 tryptophan--tRNA ligase -
  E3T02_RS05765 (E3T02_05765) opp4C 1138338..1139219 (-) 882 WP_001180280.1 oligopeptide ABC transporter permease -
  E3T02_RS05770 (E3T02_05770) opp4B 1139231..1140193 (-) 963 WP_000915997.1 oligopeptide ABC transporter permease -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38812.49 Da        Isoelectric Point: 9.6753

>NTDB_id=417267 E3T02_RS05745 WP_160194397.1 1134420..1135406(-) (coiA) [Staphylococcus aureus strain UP_1278]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNESIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKLGYKVSWLLNDVDYCHNKVKFNHFQSMFINPITRKL
HTFNLEKKQIMMFQQIQYLGGHKYVAEKRNAKIIELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTNQEVVHNYGFIFPEQIYIENHPIEWQLQVDLWLKNGKSKLVNDNLNYFKLKKFIVALESKTAIIEKLINNYLNICSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=417267 E3T02_RS05745 WP_160194397.1 1134420..1135406(-) (coiA) [Staphylococcus aureus strain UP_1278]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGCGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAATCGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAACTGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTCGCTGA
AAAAAGGAATGCCAAAATTATTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCCGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTAATCAAGAAGTAGTGCACAATTATGGTTTTATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTAGTAAATGACAACCTTAATTATTTTAAACTGAAAA
AATTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTTGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-307)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

97.866

100

0.979
  coiA Staphylococcus aureus MW2

97.256

100

0.973

Multiple sequence alignment