Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | E3T09_RS12925 | Genome accession | NZ_CP047813 |
| Coordinates | 2626584..2626979 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain UP_1500 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2621584..2631979
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3T09_RS12895 (E3T09_12895) | - | 2622787..2623191 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| E3T09_RS12900 (E3T09_12900) | - | 2623585..2623677 (+) | 93 | WP_031824610.1 | hypothetical protein | - |
| E3T09_RS12905 (E3T09_12905) | - | 2623809..2624042 (+) | 234 | WP_000384524.1 | DUF1146 family protein | - |
| E3T09_RS12910 (E3T09_12910) | murA | 2624153..2625418 (+) | 1266 | WP_000358010.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| E3T09_RS12915 (E3T09_12915) | fabZ | 2625452..2625892 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| E3T09_RS12920 (E3T09_12920) | - | 2625950..2626390 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| E3T09_RS12925 (E3T09_12925) | ssb | 2626584..2626979 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| E3T09_RS12930 (E3T09_12930) | sceD | 2627368..2628063 (+) | 696 | WP_000752001.1 | lytic transglycosylase SceD | - |
| E3T09_RS12935 (E3T09_12935) | tenA | 2628587..2629276 (+) | 690 | WP_000396067.1 | thiaminase II | - |
| E3T09_RS12940 (E3T09_12940) | thiD | 2629269..2630099 (+) | 831 | WP_000594959.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| E3T09_RS12945 (E3T09_12945) | thiM | 2630083..2630874 (+) | 792 | WP_001108483.1 | hydroxyethylthiazole kinase | - |
| E3T09_RS12950 (E3T09_12950) | thiE | 2630876..2631517 (+) | 642 | WP_043044028.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=417117 E3T09_RS12925 WP_000932694.1 2626584..2626979(+) (ssb) [Staphylococcus aureus strain UP_1500]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=417117 E3T09_RS12925 WP_000932694.1 2626584..2626979(+) (ssb) [Staphylococcus aureus strain UP_1500]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |