Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | E3T10_RS13115 | Genome accession | NZ_CP047811 |
| Coordinates | 2653958..2654353 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain UP_1522 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2648958..2659353
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3T10_RS13085 (E3T10_13085) | - | 2650184..2650588 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| E3T10_RS13095 (E3T10_13095) | - | 2651185..2651418 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| E3T10_RS13100 (E3T10_13100) | murA | 2651529..2652794 (+) | 1266 | WP_000358002.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| E3T10_RS13105 (E3T10_13105) | fabZ | 2652828..2653268 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| E3T10_RS13110 (E3T10_13110) | - | 2653324..2653764 (-) | 441 | WP_000846751.1 | YwpF-like family protein | - |
| E3T10_RS13115 (E3T10_13115) | ssb | 2653958..2654353 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| E3T10_RS13120 (E3T10_13120) | sceD | 2654742..2655437 (+) | 696 | WP_000752011.1 | lytic transglycosylase SceD | - |
| E3T10_RS13125 (E3T10_13125) | tenA | 2655825..2656514 (+) | 690 | WP_064135595.1 | thiaminase II | - |
| E3T10_RS13130 (E3T10_13130) | thiD | 2656507..2657337 (+) | 831 | WP_000594950.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| E3T10_RS13135 (E3T10_13135) | thiM | 2657321..2658112 (+) | 792 | WP_001108491.1 | hydroxyethylthiazole kinase | - |
| E3T10_RS13140 (E3T10_13140) | thiE | 2658114..2658755 (+) | 642 | WP_000483162.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=417075 E3T10_RS13115 WP_000932694.1 2653958..2654353(+) (ssb) [Staphylococcus aureus strain UP_1522]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=417075 E3T10_RS13115 WP_000932694.1 2653958..2654353(+) (ssb) [Staphylococcus aureus strain UP_1522]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACTATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACTATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |