Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | E3S72_RS13515 | Genome accession | NZ_CP047800 |
| Coordinates | 2714303..2714698 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain UP_296 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2709303..2719698
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3S72_RS13485 (E3S72_13485) | - | 2709663..2710982 (-) | 1320 | WP_001557163.1 | ISL3-like element IS1181 family transposase | - |
| E3S72_RS13490 (E3S72_13490) | - | 2711303..2711395 (+) | 93 | WP_001790611.1 | hypothetical protein | - |
| E3S72_RS13495 (E3S72_13495) | - | 2711527..2711760 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| E3S72_RS13500 (E3S72_13500) | murA | 2711871..2713136 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| E3S72_RS13505 (E3S72_13505) | fabZ | 2713170..2713610 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| E3S72_RS13510 (E3S72_13510) | - | 2713669..2714109 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| E3S72_RS13515 (E3S72_13515) | ssb | 2714303..2714698 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| E3S72_RS13520 (E3S72_13520) | sceD | 2715087..2715782 (+) | 696 | WP_160198904.1 | lytic transglycosylase SceD | - |
| E3S72_RS13525 (E3S72_13525) | tenA | 2716169..2716858 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| E3S72_RS13530 (E3S72_13530) | thiD | 2716851..2717681 (+) | 831 | WP_000594954.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| E3S72_RS13535 (E3S72_13535) | thiM | 2717665..2718456 (+) | 792 | WP_001108483.1 | hydroxyethylthiazole kinase | - |
| E3S72_RS13540 (E3S72_13540) | thiE | 2718458..2719099 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=416732 E3S72_RS13515 WP_000932694.1 2714303..2714698(+) (ssb) [Staphylococcus aureus strain UP_296]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=416732 E3S72_RS13515 WP_000932694.1 2714303..2714698(+) (ssb) [Staphylococcus aureus strain UP_296]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |