Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | E3S79_RS07385 | Genome accession | NZ_CP047795 |
| Coordinates | 1548614..1548913 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain UP_490 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1543614..1553913
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3S79_RS07360 (E3S79_07360) | gcvPA | 1544826..1546172 (-) | 1347 | WP_160192106.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| E3S79_RS07365 (E3S79_07365) | gcvT | 1546204..1547283 (-) | 1080 | WP_160192107.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| E3S79_RS07370 (E3S79_07370) | - | 1547442..1547966 (-) | 525 | WP_160192109.1 | shikimate kinase | - |
| E3S79_RS07375 (E3S79_07375) | - | 1547956..1548102 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| E3S79_RS07380 (E3S79_07380) | comGF | 1548199..1548696 (-) | 498 | WP_160192110.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| E3S79_RS07385 (E3S79_07385) | comGE | 1548614..1548913 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| E3S79_RS07390 (E3S79_07390) | comGD | 1548900..1549346 (-) | 447 | WP_001796473.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| E3S79_RS07395 (E3S79_07395) | comGC | 1549324..1549635 (-) | 312 | WP_000472255.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| E3S79_RS07400 (E3S79_07400) | comGB | 1549649..1550719 (-) | 1071 | WP_000776409.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| E3S79_RS07405 (E3S79_07405) | comGA | 1550691..1551665 (-) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| E3S79_RS07410 (E3S79_07410) | - | 1551717..1552340 (-) | 624 | WP_001223009.1 | MBL fold metallo-hydrolase | - |
| E3S79_RS07415 (E3S79_07415) | - | 1552337..1552666 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| E3S79_RS07420 (E3S79_07420) | - | 1552666..1553652 (-) | 987 | WP_000161307.1 | ROK family glucokinase | - |
| E3S79_RS07425 (E3S79_07425) | - | 1553649..1553852 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=416504 E3S79_RS07385 WP_000844413.1 1548614..1548913(-) (comGE) [Staphylococcus aureus strain UP_490]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=416504 E3S79_RS07385 WP_000844413.1 1548614..1548913(-) (comGE) [Staphylococcus aureus strain UP_490]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATATGTGCCATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATATGTGCCATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |