Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   E3S81_RS05840 Genome accession   NZ_CP047794
Coordinates   1155047..1156033 (-) Length   328 a.a.
NCBI ID   WP_000959278.1    Uniprot ID   A0A6B5F529
Organism   Staphylococcus aureus strain UP_551     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context


Location: 1150047..1161033
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E3S81_RS05815 (E3S81_05815) - 1150307..1150654 (-) 348 WP_001242107.1 hypothetical protein -
  E3S81_RS05820 (E3S81_05820) - 1150840..1151433 (+) 594 WP_000224616.1 CYTH domain-containing protein -
  E3S81_RS05825 (E3S81_05825) - 1151537..1151902 (+) 366 WP_000214067.1 truncated hemoglobin YjbI -
  E3S81_RS05830 (E3S81_05830) yjbH 1151925..1152731 (+) 807 WP_000896694.1 protease adaptor protein YjbH -
  E3S81_RS05835 (E3S81_05835) pepF 1153191..1154999 (-) 1809 WP_000082725.1 oligoendopeptidase F -
  E3S81_RS05840 (E3S81_05840) coiA 1155047..1156033 (-) 987 WP_000959278.1 competence protein CoiA Machinery gene
  E3S81_RS05845 (E3S81_05845) mecA 1156154..1156873 (-) 720 WP_001217727.1 adaptor protein MecA -
  E3S81_RS05850 (E3S81_05850) spxA 1157254..1157649 (-) 396 WP_000258003.1 transcriptional regulator SpxA -
  E3S81_RS05855 (E3S81_05855) trpS 1157944..1158933 (+) 990 WP_000448929.1 tryptophan--tRNA ligase -
  E3S81_RS05860 (E3S81_05860) opp4C 1158975..1159856 (-) 882 WP_001180269.1 oligopeptide ABC transporter permease -
  E3S81_RS05865 (E3S81_05865) opp4B 1159868..1160830 (-) 963 WP_000593417.1 oligopeptide ABC transporter permease -

Sequence


Protein


Download         Length: 328 a.a.        Molecular weight: 38679.31 Da        Isoelectric Point: 9.5882

>NTDB_id=416470 E3S81_RS05840 WP_000959278.1 1155047..1156033(-) (coiA) [Staphylococcus aureus strain UP_551]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNESIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPITRKL
HTFNLEKKQIMMFQQIQYIGGHKYVAEKGNAKISELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTVQEVVHNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLLSDNLNYFKLKKFIVALDSKTAIIEKLINNYLNICSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=416470 E3S81_RS05840 WP_000959278.1 1155047..1156033(-) (coiA) [Staphylococcus aureus strain UP_551]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGCGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAATCGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTTAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATATAGGCGGGCACAAATATGTCGCTGA
AAAAGGGAATGCCAAAATTAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTTG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAGTTACAG
TTAACTGTTCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTACTAAGTGACAATCTTAATTATTTTAAACTGAAAA
AGTTTATTGTTGCTCTAGATAGCAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTTGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6B5F529

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

96.646

100

0.966

  coiA Staphylococcus aureus MW2

96.646

100

0.966


Multiple sequence alignment