Detailed information    

insolico Bioinformatically predicted

Overview

Name   dprA   Type   Machinery gene
Locus tag   E3S81_RS04455 Genome accession   NZ_CP047794
Coordinates   873358..874230 (-) Length   290 a.a.
NCBI ID   WP_157724232.1    Uniprot ID   -
Organism   Staphylococcus aureus strain UP_551     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 868358..879230
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E3S81_RS04445 (E3S81_04445) trmFO 869646..870953 (-) 1308 WP_000195254.1 methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO -
  E3S81_RS04450 (E3S81_04450) topA 871109..873184 (-) 2076 WP_078371700.1 type I DNA topoisomerase -
  E3S81_RS04455 (E3S81_04455) dprA 873358..874230 (-) 873 WP_157724232.1 DNA-processing protein DprA Machinery gene
  E3S81_RS04460 (E3S81_04460) fmhC 874402..875646 (-) 1245 WP_106459766.1 FemA/FemB family glycyltransferase FmhC -
  E3S81_RS04465 (E3S81_04465) - 875674..875826 (-) 153 Protein_855 cell wall hydrolase -
  E3S81_RS14285 - 875830..875886 (-) 57 Protein_856 YSIRK-type signal peptide-containing protein -
  E3S81_RS04470 (E3S81_04470) sucD 876073..876981 (-) 909 WP_000110253.1 succinate--CoA ligase subunit alpha -
  E3S81_RS04475 (E3S81_04475) sucC 877003..878169 (-) 1167 WP_001020801.1 ADP-forming succinate--CoA ligase subunit beta -
  E3S81_RS04480 (E3S81_04480) - 878278..879045 (-) 768 WP_000176391.1 ribonuclease HII -

Sequence

Protein


Download         Length: 290 a.a.        Molecular weight: 33585.03 Da        Isoelectric Point: 9.6077

>NTDB_id=416468 E3S81_RS04455 WP_157724232.1 873358..874230(-) (dprA) [Staphylococcus aureus strain UP_551]
MIRLFLLKLYWAHFSTKQIHQFLMAYPNVIKEGGRKKDSYLCEWVNREENVHLLRKYYAFIKLDHNDIIKELQKLKVSYI
TYMDTEYPVLLKEIYQFPLLLFYKGNIKLINNMHHLAVVGARDSTNYTQQSLEFLLSNDKSKYLTIVSGLAQGADAMAHQ
IALKYHLPTIAVLAFGHQTHYPKSTLALRNKIEEKGLVISEYPPHTPIAKYRFPERNRIISGLSKGVLITEAKEQSGSHI
TIDFALEQNRNVYVLPGSMFNPMTKGNLLRIQEGAKVVLNANDIFEDYYI

Nucleotide


Download         Length: 873 bp        

>NTDB_id=416468 E3S81_RS04455 WP_157724232.1 873358..874230(-) (dprA) [Staphylococcus aureus strain UP_551]
TTGATTAGACTATTTTTGCTTAAGTTATACTGGGCACACTTTTCGACTAAACAAATTCATCAATTTTTAATGGCATATCC
TAATGTAATTAAAGAGGGGGGCAGAAAAAAAGATAGTTATTTATGTGAATGGGTGAATAGGGAAGAAAATGTTCATTTAT
TACGTAAATACTATGCTTTTATAAAACTTGATCATAACGATATTATTAAAGAACTGCAGAAATTAAAAGTAAGTTACATT
ACATATATGGATACTGAATACCCAGTGCTATTAAAAGAAATATATCAATTTCCATTACTTCTTTTCTATAAAGGGAACAT
CAAATTAATAAATAATATGCATCATTTGGCAGTAGTAGGTGCAAGAGATTCTACAAATTATACCCAACAGTCTTTAGAAT
TTTTATTATCAAATGATAAAAGCAAATATTTAACAATTGTTTCCGGCCTTGCTCAAGGAGCTGATGCAATGGCACATCAA
ATAGCTTTAAAATACCATCTCCCTACAATAGCAGTTTTAGCCTTTGGCCATCAAACACATTATCCCAAAAGTACATTAGC
ATTAAGAAATAAAATAGAAGAAAAAGGTTTAGTTATATCCGAATATCCACCACATACACCAATTGCTAAATATAGATTTC
CTGAGCGCAATAGAATTATCAGCGGTTTGTCAAAAGGGGTTTTAATTACTGAGGCTAAGGAACAAAGTGGCAGTCACATC
ACGATAGATTTTGCATTAGAGCAAAATAGAAATGTTTATGTTTTACCTGGATCTATGTTTAATCCTATGACAAAAGGTAA
TTTATTACGTATTCAAGAAGGTGCTAAGGTAGTATTAAACGCTAATGATATATTTGAAGACTACTATATTTAA

Domains

Predicted by InterproScan.

DNA recombination-mediator protein A (DNA_processg_A)

(72-279)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Staphylococcus aureus MW2

98.276

100

0.983
  dprA Staphylococcus aureus N315

97.931

100

0.979

Multiple sequence alignment