Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | E3S90_RS12985 | Genome accession | NZ_CP047790 |
| Coordinates | 2644552..2644947 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain UP_830 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2639552..2649947
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3S90_RS12955 (E3S90_12955) | - | 2640813..2641217 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| E3S90_RS12960 (E3S90_12960) | - | 2641553..2641645 (+) | 93 | WP_031824610.1 | hypothetical protein | - |
| E3S90_RS12965 (E3S90_12965) | - | 2641777..2642010 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| E3S90_RS12970 (E3S90_12970) | murA | 2642121..2643386 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| E3S90_RS12975 (E3S90_12975) | fabZ | 2643420..2643860 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| E3S90_RS12980 (E3S90_12980) | - | 2643918..2644358 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| E3S90_RS12985 (E3S90_12985) | ssb | 2644552..2644947 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| E3S90_RS12990 (E3S90_12990) | sceD | 2645336..2646031 (+) | 696 | WP_000752001.1 | lytic transglycosylase SceD | - |
| E3S90_RS12995 (E3S90_12995) | tenA | 2646418..2647107 (+) | 690 | WP_000396064.1 | thiaminase II | - |
| E3S90_RS13000 (E3S90_13000) | thiD | 2647100..2647930 (+) | 831 | WP_000594951.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| E3S90_RS13005 (E3S90_13005) | thiM | 2647914..2648705 (+) | 792 | WP_001108489.1 | hydroxyethylthiazole kinase | - |
| E3S90_RS13010 (E3S90_13010) | thiE | 2648707..2649348 (+) | 642 | WP_160195064.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=416313 E3S90_RS12985 WP_000932694.1 2644552..2644947(+) (ssb) [Staphylococcus aureus strain UP_830]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=416313 E3S90_RS12985 WP_000932694.1 2644552..2644947(+) (ssb) [Staphylococcus aureus strain UP_830]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |