Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   H7791_RS06710 Genome accession   NZ_CP060644
Coordinates   1363787..1364821 (-) Length   344 a.a.
NCBI ID   WP_030126324.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain TSPY1309     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1358787..1369821
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7791_RS06675 (H7791_06670) - 1359563..1359865 (-) 303 WP_002983488.1 YlxQ-related RNA-binding protein -
  H7791_RS06680 (H7791_06675) rnpM 1359858..1360154 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  H7791_RS06685 (H7791_06680) nusA 1360170..1361327 (-) 1158 WP_129321696.1 transcription termination factor NusA -
  H7791_RS06690 (H7791_06685) rimP 1361502..1362038 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  H7791_RS06700 (H7791_06695) trmB 1362297..1362932 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  H7791_RS06705 (H7791_06700) ccrZ 1362932..1363723 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  H7791_RS06710 (H7791_06705) pptB 1363787..1364821 (-) 1035 WP_030126324.1 ABC transporter permease Regulator
  H7791_RS06715 (H7791_06710) pptA 1364824..1365549 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  H7791_RS06720 (H7791_06715) - 1365621..1366040 (+) 420 WP_002983376.1 HIT family protein -
  H7791_RS06725 (H7791_06720) - 1366037..1366393 (+) 357 WP_030126323.1 hypothetical protein -
  H7791_RS06730 (H7791_06725) brpA 1366504..1367787 (-) 1284 WP_030126322.1 biofilm formation/cell division transcriptional regulator BrpA -
  H7791_RS06735 (H7791_06730) - 1367796..1368320 (-) 525 WP_063811834.1 GNAT family N-acetyltransferase -
  H7791_RS06740 (H7791_06735) tsaE 1368295..1368756 (-) 462 WP_030126320.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 40214.40 Da        Isoelectric Point: 10.3713

>NTDB_id=416098 H7791_RS06710 WP_030126324.1 1363787..1364821(-) (pptB) [Streptococcus pyogenes strain TSPY1309]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVALSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNVLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=416098 H7791_RS06710 WP_030126324.1 1363787..1364821(-) (pptB) [Streptococcus pyogenes strain TSPY1309]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTCTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGCGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATTCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATGTGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA

Domains

Predicted by InterProScan.

Bacterial ABC transporter protein EcsB (EcsB)

(2-151)

Bacterial ABC transporter protein EcsB (EcsB)

(158-330)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43
  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427