Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   H7792_RS04835 Genome accession   NZ_CP060643
Coordinates   990439..990627 (-) Length   62 a.a.
NCBI ID   WP_136022789.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain TSPY416     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 985439..995627
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7792_RS04820 (H7792_04820) - 987079..988326 (-) 1248 WP_111713816.1 tetratricopeptide repeat protein -
  H7792_RS04825 (H7792_04825) - 988316..989497 (-) 1182 WP_002990002.1 AI-2E family transporter -
  H7792_RS04830 (H7792_04830) mutX 989555..990031 (-) 477 WP_002984880.1 NUDIX hydrolase Machinery gene
  H7792_RS04835 (H7792_04835) prx 990439..990627 (-) 189 WP_136022789.1 Paratox Regulator
  H7792_RS04840 (H7792_04840) spel 990742..991530 (-) 789 WP_020833516.1 streptococcal pyrogenic exotoxin SpeL -
  H7792_RS04845 (H7792_04845) spem 991812..992525 (-) 714 WP_014635497.1 streptococcal pyrogenic exotoxin SpeM -
  H7792_RS04850 (H7792_04850) - 992881..994086 (-) 1206 WP_136115266.1 Fic family protein -
  H7792_RS04855 (H7792_04855) - 994271..995476 (-) 1206 WP_228650289.1 glucosaminidase domain-containing protein -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7268.17 Da        Isoelectric Point: 3.9282

>NTDB_id=415993 H7792_RS04835 WP_136022789.1 990439..990627(-) (prx) [Streptococcus pyogenes strain TSPY416]
MLTYDEFKQAIDNGYITADTVMIVRKNGQIFDYVLPHEEIRDWEVVTIERISDVMAELSESE

Nucleotide


Download         Length: 189 bp        

>NTDB_id=415993 H7792_RS04835 WP_136022789.1 990439..990627(-) (prx) [Streptococcus pyogenes strain TSPY416]
ATGCTAACATACGACGAATTTAAGCAAGCGATTGACAATGGATATATCACAGCAGACACAGTTATGATCGTGCGCAAGAA
CGGACAGATTTTTGATTATGTGTTGCCGCATGAGGAGATAAGAGATTGGGAGGTTGTGACAATCGAGCGGATATCAGATG
TTATGGCAGAACTTTCTGAGTCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

76.271

95.161

0.726
  prx Streptococcus pyogenes MGAS315

77.586

93.548

0.726
  prx Streptococcus pyogenes MGAS315

71.667

96.774

0.694
  prx Streptococcus pyogenes MGAS8232

72.881

95.161

0.694
  prx Streptococcus pyogenes MGAS315

88.095

67.742

0.597
  prx Streptococcus pyogenes MGAS315

85.366

66.129

0.565
  prx Streptococcus pyogenes MGAS315

76.19

67.742

0.516

Multiple sequence alignment