Detailed information    

insolico Bioinformatically predicted

Overview


Name   braS   Type   Regulator
Locus tag   E3T04_RS12575 Genome accession   NZ_CP047782
Coordinates   2470586..2471473 (-) Length   295 a.a.
NCBI ID   WP_000143430.1    Uniprot ID   -
Organism   Staphylococcus aureus strain UP_1352     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2465586..2476473
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E3T04_RS12545 (E3T04_12545) - 2465605..2465697 (+) 93 WP_031918515.1 hypothetical protein -
  E3T04_RS12550 (E3T04_12550) - 2465805..2466302 (-) 498 WP_001065273.1 glutathione peroxidase -
  E3T04_RS12555 (E3T04_12555) - 2466312..2466572 (-) 261 WP_078056482.1 hypothetical protein -
  E3T04_RS12560 (E3T04_12560) - 2466954..2467067 (-) 114 WP_031918517.1 hypothetical protein -
  E3T04_RS12565 (E3T04_12565) - 2467726..2469726 (-) 2001 WP_000776748.1 ABC transporter permease -
  E3T04_RS12570 (E3T04_12570) - 2469723..2470478 (-) 756 WP_000923769.1 ABC transporter ATP-binding protein -
  E3T04_RS12575 (E3T04_12575) braS 2470586..2471473 (-) 888 WP_000143430.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  E3T04_RS12580 (E3T04_12580) braR 2471484..2472149 (-) 666 WP_000697883.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  E3T04_RS12585 (E3T04_12585) - 2472175..2472375 (-) 201 WP_000604725.1 hypothetical protein -
  E3T04_RS12590 (E3T04_12590) - 2472573..2473996 (+) 1424 Protein_2456 alkaline phosphatase -
  E3T04_RS15160 - 2474056..2474157 (-) 102 WP_000731972.1 SE2200 family small protein -
  E3T04_RS12600 (E3T04_12600) - 2474279..2474734 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  E3T04_RS12605 (E3T04_12605) - 2474975..2475736 (-) 762 WP_000323452.1 alpha/beta hydrolase family protein -

Sequence


Protein


Download         Length: 295 a.a.        Molecular weight: 34034.25 Da        Isoelectric Point: 5.6141

>NTDB_id=415982 E3T04_RS12575 WP_000143430.1 2470586..2471473(-) (braS) [Staphylococcus aureus strain UP_1352]
MTFLKSITQETAIVIVIFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIEDLENALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLYVKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=415982 E3T04_RS12575 WP_000143430.1 2470586..2471473(-) (braS) [Staphylococcus aureus strain UP_1352]
ATGACCTTTCTTAAAAGTATTACTCAGGAAACAGCAATAGTCATAGTTATTTTTGCTTTATTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAGACTTAGAAAATGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ATTGTTACTTGAAAGAGATGAGCCTAATGTTGTGAATCGTGTTCGTCAAGAGGTTATTCAAATCGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAACAATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTATACGTAAAAGATAATGGTATCGGTATTAGTGAAGCGGACTTGCCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGGCAAAGTAACTCAAGTGGGATTGGTTTATTTATCGTAAAACA
AATTTCAACTCACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

98.644

100

0.986


Multiple sequence alignment