Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   H7793_RS02495 Genome accession   NZ_CP060642
Coordinates   470636..471670 (+) Length   344 a.a.
NCBI ID   WP_002988663.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain TSPY1312     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 465636..476670
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7793_RS02465 (H7793_02480) tsaE 466701..467162 (+) 462 WP_002983367.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  H7793_RS02470 (H7793_02485) - 467137..467661 (+) 525 WP_002983369.1 GNAT family N-acetyltransferase -
  H7793_RS02475 (H7793_02490) brpA 467670..468953 (+) 1284 WP_002983372.1 biofilm formation/cell division transcriptional regulator BrpA -
  H7793_RS02480 (H7793_02495) - 469064..469420 (-) 357 WP_047235695.1 hypothetical protein -
  H7793_RS02485 (H7793_02500) - 469417..469836 (-) 420 WP_002983376.1 HIT family protein -
  H7793_RS02490 (H7793_02505) pptA 469908..470633 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  H7793_RS02495 (H7793_02510) pptB 470636..471670 (+) 1035 WP_002988663.1 ABC transporter permease Regulator
  H7793_RS02500 (H7793_02515) ccrZ 471734..472525 (+) 792 WP_002983385.1 cell cycle regulator CcrZ -
  H7793_RS02505 (H7793_02520) trmB 472525..473160 (+) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  H7793_RS02515 (H7793_02530) rimP 473419..473955 (+) 537 WP_002988815.1 ribosome maturation factor RimP -
  H7793_RS02520 (H7793_02535) nusA 474130..475287 (+) 1158 WP_002988817.1 transcription termination factor NusA -
  H7793_RS02525 (H7793_02540) rnpM 475303..475599 (+) 297 WP_002983486.1 RNase P modulator RnpM -
  H7793_RS02530 (H7793_02545) - 475592..475894 (+) 303 WP_111689225.1 YlxQ-related RNA-binding protein -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 40241.47 Da        Isoelectric Point: 10.4168

>NTDB_id=415872 H7793_RS02495 WP_002988663.1 470636..471670(+) (pptB) [Streptococcus pyogenes strain TSPY1312]
MKALFLKRRQNFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNVLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=415872 H7793_RS02495 WP_002988663.1 470636..471670(+) (pptB) [Streptococcus pyogenes strain TSPY1312]
ATGAAAGCATTATTTCTGAAACGCCGTCAAAACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTCTAGGTTTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATTCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATGTGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43

  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427


Multiple sequence alignment