Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   H7797_RS07550 Genome accession   NZ_CP060639
Coordinates   1512195..1513229 (-) Length   344 a.a.
NCBI ID   WP_010922583.1    Uniprot ID   A0A0H2UWB0
Organism   Streptococcus pyogenes strain TSPY153     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1507195..1518229
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7797_RS07515 (H7797_07485) - 1507971..1508273 (-) 303 WP_111693350.1 YlxQ-related RNA-binding protein -
  H7797_RS07520 (H7797_07490) rnpM 1508266..1508562 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  H7797_RS07525 (H7797_07495) nusA 1508578..1509735 (-) 1158 WP_228636940.1 transcription termination factor NusA -
  H7797_RS07530 (H7797_07500) rimP 1509910..1510446 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  H7797_RS07540 (H7797_07510) trmB 1510705..1511340 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  H7797_RS07545 (H7797_07515) ccrZ 1511340..1512131 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  H7797_RS07550 (H7797_07520) pptB 1512195..1513229 (-) 1035 WP_010922583.1 ABC transporter permease Regulator
  H7797_RS07555 (H7797_07525) pptA 1513232..1513957 (-) 726 WP_111693351.1 ABC transporter ATP-binding protein Regulator
  H7797_RS07560 (H7797_07530) - 1514029..1514448 (+) 420 WP_002983376.1 HIT family protein -
  H7797_RS07565 (H7797_07535) - 1514445..1514801 (+) 357 WP_030126323.1 hypothetical protein -
  H7797_RS07570 (H7797_07540) brpA 1514912..1516195 (-) 1284 WP_111693352.1 biofilm formation/cell division transcriptional regulator BrpA -
  H7797_RS07575 (H7797_07545) - 1516204..1516728 (-) 525 WP_063811834.1 GNAT family N-acetyltransferase -
  H7797_RS07580 (H7797_07550) tsaE 1516703..1517164 (-) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 40274.52 Da        Isoelectric Point: 10.3713

>NTDB_id=415622 H7797_RS07550 WP_010922583.1 1512195..1513229(-) (pptB) [Streptococcus pyogenes strain TSPY153]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNMLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=415622 H7797_RS07550 WP_010922583.1 1512195..1513229(-) (pptB) [Streptococcus pyogenes strain TSPY153]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTCTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATATGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA

Domains

Predicted by InterProScan.

Bacterial ABC transporter protein EcsB (EcsB)

(158-330)

Bacterial ABC transporter protein EcsB (EcsB)

(2-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2UWB0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43
  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427