Detailed information
Bioinformatically predicted
Overview
| Name | exbB | Type | Machinery gene |
| Locus tag | GVI48_RS21930 | Genome accession | NZ_CP047697 |
| Coordinates | 4726714..4727349 (-) | Length | 211 a.a. |
| NCBI ID | WP_003091163.1 | Uniprot ID | A0A0H2ZBU7 |
| Organism | Pseudomonas aeruginosa strain RD1-3 | ||
| Function | ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 4721714..4732349
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GVI48_RS21900 | murB | 4722812..4723831 (-) | 1020 | WP_014602712.1 | UDP-N-acetylmuramate dehydrogenase | - |
| GVI48_RS21905 | - | 4723828..4724292 (-) | 465 | WP_004350898.1 | low molecular weight protein-tyrosine-phosphatase | - |
| GVI48_RS21910 | kdsB | 4724292..4725056 (-) | 765 | WP_003106922.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| GVI48_RS21915 | - | 4725056..4725241 (-) | 186 | WP_003091157.1 | Trm112 family protein | - |
| GVI48_RS21920 | lpxK | 4725279..4726277 (-) | 999 | WP_003091159.1 | tetraacyldisaccharide 4'-kinase | - |
| GVI48_RS21925 | - | 4726277..4726717 (-) | 441 | WP_003091161.1 | ExbD/TolR family protein | - |
| GVI48_RS21930 | exbB | 4726714..4727349 (-) | 636 | WP_003091163.1 | MotA/TolQ/ExbB proton channel family protein | Machinery gene |
| GVI48_RS21935 | comA | 4727422..4729647 (-) | 2226 | WP_031652574.1 | DNA internalization-related competence protein ComEC/Rec2 | Machinery gene |
| GVI48_RS21940 | - | 4729778..4730311 (+) | 534 | WP_003091165.1 | DUF2062 domain-containing protein | - |
| GVI48_RS21945 | - | 4730399..4731643 (-) | 1245 | WP_003105198.1 | lipoprotein-releasing ABC transporter permease subunit | - |
Sequence
Protein
Download Length: 211 a.a. Molecular weight: 22890.06 Da Isoelectric Point: 6.7278
>NTDB_id=415433 GVI48_RS21930 WP_003091163.1 4726714..4727349(-) (exbB) [Pseudomonas aeruginosa strain RD1-3]
MWELVQAGGWMMLPIILSSIAATAIVAERLWTLRKSRVAPPELLGQVWKQIKGKQLSAQKLKDLRANSPLGEILAAGLAN
SKHGREIMKECIEEAASGVIHELERYLNALGTIAAMAPLLGLLGTVFGMIQIFGAFMDNGMANSPMLAAGISKALITTAA
GLLVAIPAVFFHRYLLRRVDELVIAMEQEAIKLVEVVQGDREVDYVEEGKA
MWELVQAGGWMMLPIILSSIAATAIVAERLWTLRKSRVAPPELLGQVWKQIKGKQLSAQKLKDLRANSPLGEILAAGLAN
SKHGREIMKECIEEAASGVIHELERYLNALGTIAAMAPLLGLLGTVFGMIQIFGAFMDNGMANSPMLAAGISKALITTAA
GLLVAIPAVFFHRYLLRRVDELVIAMEQEAIKLVEVVQGDREVDYVEEGKA
Nucleotide
Download Length: 636 bp
>NTDB_id=415433 GVI48_RS21930 WP_003091163.1 4726714..4727349(-) (exbB) [Pseudomonas aeruginosa strain RD1-3]
GTGTGGGAACTGGTTCAAGCCGGCGGCTGGATGATGCTGCCGATCATTCTGAGTTCGATCGCCGCCACCGCCATCGTCGC
GGAGCGCCTGTGGACGCTGCGCAAGAGCCGCGTCGCGCCGCCCGAGCTGCTCGGCCAGGTGTGGAAGCAGATCAAGGGCA
AGCAACTGAGCGCCCAGAAGCTCAAGGACCTGCGCGCCAACTCGCCGCTGGGAGAGATCCTCGCCGCCGGCCTGGCCAAC
TCCAAGCACGGTCGCGAGATCATGAAGGAGTGCATCGAGGAGGCTGCTTCCGGTGTCATCCACGAGCTGGAGCGCTACCT
CAACGCCCTCGGCACCATCGCCGCGATGGCGCCGCTGCTGGGCCTGCTGGGCACGGTGTTCGGCATGATCCAGATCTTCG
GCGCCTTCATGGACAACGGCATGGCCAACTCGCCGATGCTCGCCGCGGGCATCTCCAAGGCATTGATCACCACCGCTGCC
GGCCTGCTGGTGGCGATTCCGGCGGTGTTCTTCCATCGCTACCTGCTGCGGCGGGTCGACGAACTGGTGATCGCCATGGA
GCAGGAGGCCATCAAGCTGGTGGAAGTGGTGCAGGGCGATCGTGAAGTCGACTACGTCGAGGAAGGCAAAGCGTGA
GTGTGGGAACTGGTTCAAGCCGGCGGCTGGATGATGCTGCCGATCATTCTGAGTTCGATCGCCGCCACCGCCATCGTCGC
GGAGCGCCTGTGGACGCTGCGCAAGAGCCGCGTCGCGCCGCCCGAGCTGCTCGGCCAGGTGTGGAAGCAGATCAAGGGCA
AGCAACTGAGCGCCCAGAAGCTCAAGGACCTGCGCGCCAACTCGCCGCTGGGAGAGATCCTCGCCGCCGGCCTGGCCAAC
TCCAAGCACGGTCGCGAGATCATGAAGGAGTGCATCGAGGAGGCTGCTTCCGGTGTCATCCACGAGCTGGAGCGCTACCT
CAACGCCCTCGGCACCATCGCCGCGATGGCGCCGCTGCTGGGCCTGCTGGGCACGGTGTTCGGCATGATCCAGATCTTCG
GCGCCTTCATGGACAACGGCATGGCCAACTCGCCGATGCTCGCCGCGGGCATCTCCAAGGCATTGATCACCACCGCTGCC
GGCCTGCTGGTGGCGATTCCGGCGGTGTTCTTCCATCGCTACCTGCTGCGGCGGGTCGACGAACTGGTGATCGCCATGGA
GCAGGAGGCCATCAAGCTGGTGGAAGTGGTGCAGGGCGATCGTGAAGTCGACTACGTCGAGGAAGGCAAAGCGTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| exbB | Pseudomonas stutzeri DSM 10701 |
81.043 |
100 |
0.81 |