Detailed information NTG0415306

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: HUG14_RS02195
• Genome accession: NZ_CP060580
• Coordinates: 454054..455130 (+)
• Length: 358 a.a.
• NCBI ID: WP_033900817.1
• Uniprot ID: -
• Organism: Lactococcus lactis strain K_LL005
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 449054..460130

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HUG14_RS02170 (HUG14_02170)	pgsA	449214..449786 (-)	573	WP_012898490.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
HUG14_RS02175 (HUG14_02175)	-	449827..450723 (-)	897	WP_109991315.1	RodZ family helix-turn-helix domain-containing protein	-
HUG14_RS02180 (HUG14_02180)	yfmH	450935..452218 (-)	1284	WP_017865078.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
HUG14_RS02185 (HUG14_02185)	yfmF	452208..453494 (-)	1287	WP_187398478.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
HUG14_RS02190 (HUG14_02190)	yaaA	453692..454054 (+)	363	WP_109991316.1	S4 domain-containing protein YaaA	-
HUG14_RS02195 (HUG14_02195)	recF	454054..455130 (+)	1077	WP_033900817.1	DNA replication/repair protein RecF	Machinery gene
HUG14_RS02200 (HUG14_02200)	-	455217..455586 (-)	370	Protein_427	carboxymuconolactone decarboxylase family protein	-
HUG14_RS02205 (HUG14_02205)	-	455663..456040 (+)	378	WP_109991317.1	MerR family transcriptional regulator	-
HUG14_RS02210 (HUG14_02210)	-	456054..456989 (-)	936	WP_033900815.1	alpha/beta hydrolase	-
HUG14_RS02215 (HUG14_02215)	galE	457094..458074 (-)	981	WP_033900814.1	UDP-glucose 4-epimerase GalE	-

Sequence

Protein

• Length: 358 a.a.
• Molecular weight: 41384.28 Da
• Isoelectric Point: 6.8652

>NTDB_id=415306 HUG14_RS02195 WP_033900817.1 454054..455130(+) (recF) [Lactococcus lactis strain K_LL005]
MKLKAIELKNFRNYEELKLDFHPNLNIFLGQNAQGKTNILEAIHFLALTRSHRTSHDKELISWSQQEMKVSGVVEKAHVT
VPLEVQLSPKGRIAKANHLKENRLADYIGQLKILMFAPENLELVKGSPATRRKFMDIELGQIHAVYLYDSMRYNRALKER
NAYLKFDKDKIDKNFLSVLDGQLAEHGNKIMLERQNFIDKLEVHAKKIHEQLTHGKENLKIIYNQNVKTDFSKELLSRQD
HDIFRHQTSVGPHRDDLQFFINEINVADFGSQGQQRTVALSIKLAEIDLIFEETGEYPILLLDDVMSELDNHRQLDLIET
SLGKTQTFITTTTLDHLKNLPENLSIFHVNAGTIEQEQ

Nucleotide

• Length: 1077 bp

>NTDB_id=415306 HUG14_RS02195 WP_033900817.1 454054..455130(+) (recF) [Lactococcus lactis strain K_LL005]
ATGAAACTCAAAGCAATTGAACTCAAAAATTTTCGTAATTATGAGGAATTAAAACTTGATTTTCATCCTAATCTCAATAT
TTTTTTAGGACAAAATGCTCAAGGGAAAACAAATATTCTTGAGGCGATTCATTTTTTAGCACTCACTCGTAGTCACAGAA
CAAGTCACGACAAAGAGCTCATTTCTTGGTCGCAACAAGAAATGAAGGTCTCAGGAGTCGTTGAAAAAGCTCATGTAACT
GTTCCACTTGAAGTTCAATTAAGTCCCAAAGGGAGAATTGCTAAAGCCAATCATCTCAAAGAAAATCGCTTAGCCGACTA
CATTGGTCAACTAAAAATCTTGATGTTTGCACCTGAAAATTTGGAATTAGTCAAAGGTTCTCCAGCTACCCGCAGAAAAT
TTATGGATATTGAACTGGGACAAATCCATGCGGTTTACCTTTATGATTCCATGCGATATAATCGTGCGTTAAAAGAACGG
AATGCTTACTTAAAATTTGATAAAGACAAAATTGATAAAAATTTTTTAAGTGTTCTTGACGGACAATTAGCTGAACATGG
TAATAAAATCATGCTTGAGCGGCAAAATTTTATTGATAAACTTGAAGTTCATGCAAAAAAAATCCATGAGCAACTTACTC
ATGGTAAAGAAAATTTAAAAATCATTTATAATCAAAATGTGAAAACTGACTTTTCAAAAGAATTATTGAGCAGACAAGAC
CATGATATTTTTAGGCATCAAACATCGGTTGGACCTCATCGTGACGATTTACAATTTTTTATCAATGAGATTAATGTTGC
TGATTTTGGTAGTCAAGGACAACAACGAACCGTTGCTCTCTCAATTAAATTAGCAGAAATTGATTTAATTTTTGAAGAGA
CTGGTGAGTATCCGATTTTACTTTTAGATGATGTCATGAGTGAATTAGACAATCATCGTCAACTTGATTTGATTGAAACA
AGTTTGGGTAAAACACAAACTTTTATAACTACAACTACTCTTGATCATCTTAAAAATTTACCTGAAAATCTGAGTATTTT
CCATGTTAATGCTGGAACCATTGAACAAGAGCAATAA

Domains

Predicted by InterProScan.

• AAA ATPase domain (AAA_15) (1-174)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	55	100	0.553
recF	Bacillus subtilis subsp. subtilis str. 168	45.977	97.207	0.447