Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   H4B46_RS04205 Genome accession   NZ_CP060504
Coordinates   918020..918655 (+) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii strain AbCTX9     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 913020..923655
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H4B46_RS04185 (H4B46_04180) - 913099..913914 (+) 816 WP_000011162.1 DsbC family protein -
  H4B46_RS04190 (H4B46_04185) - 914159..915460 (+) 1302 WP_000805827.1 homoserine dehydrogenase -
  H4B46_RS04195 (H4B46_04190) thrC 915516..916655 (+) 1140 WP_000063593.1 threonine synthase -
  H4B46_RS04200 (H4B46_04195) pbpG 916761..917807 (-) 1047 WP_003384760.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  H4B46_RS04205 (H4B46_04200) letA 918020..918655 (+) 636 WP_000633799.1 response regulator Regulator
  H4B46_RS04210 (H4B46_04205) pilS 918666..920234 (+) 1569 WP_001160344.1 ATP-binding protein Regulator
  H4B46_RS04215 (H4B46_04210) - 920258..921679 (+) 1422 WP_024432424.1 sigma-54 dependent transcriptional regulator -
  H4B46_RS04220 (H4B46_04215) - 921683..922867 (-) 1185 WP_000939107.1 S41 family peptidase -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=415232 H4B46_RS04205 WP_000633799.1 918020..918655(+) (letA) [Acinetobacter baumannii strain AbCTX9]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=415232 H4B46_RS04205 WP_000633799.1 918020..918655(+) (letA) [Acinetobacter baumannii strain AbCTX9]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTACTGCTGG
ATGTCAACATGCCGGGCATCGGTGGCGTAGAAACAACCCGTCGTTTATTACAGACGGCTCCAGAGACGAAAGTCATTGCT
GTAAGCGGCCTCGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACGAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCGTTATCGGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGCGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGCGATGTCAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAGCCATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(147-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55
  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55