Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   H8S71_RS20065 Genome accession   NZ_CP060417
Coordinates   3943575..3944369 (-) Length   264 a.a.
NCBI ID   WP_003242676.1    Uniprot ID   C0SP91
Organism   Bacillus subtilis subsp. subtilis strain ONU 559     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3938575..3949369
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H8S71_RS20040 (H8S71_20035) rocD 3939152..3940357 (-) 1206 WP_187001997.1 ornithine aminotransferase -
  H8S71_RS20045 (H8S71_20040) rocR 3940597..3941982 (+) 1386 WP_077670828.1 arginine utilization regulatory protein RocR -
  H8S71_RS20050 (H8S71_20045) - 3941964..3942131 (-) 168 Protein_3922 ATP-binding protein -
  H8S71_RS20055 (H8S71_20050) - 3942141..3942271 (-) 131 Protein_3923 hypothetical protein -
  H8S71_RS20060 (H8S71_20055) htrA 3942291..3943493 (-) 1203 WP_015250812.1 serine protease HtrC Regulator
  H8S71_RS20065 (H8S71_20060) vicX 3943575..3944369 (-) 795 WP_003242676.1 MBL fold metallo-hydrolase Regulator
  H8S71_RS20070 (H8S71_20065) walI 3944391..3945233 (-) 843 WP_029318542.1 WalRK two-component regulatory system regulator WalI -
  H8S71_RS20075 (H8S71_20070) walH 3945220..3946587 (-) 1368 WP_029318541.1 WalRK two-component regulatory system regulator WalH -
  H8S71_RS20080 (H8S71_20075) walK 3946577..3948412 (-) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  H8S71_RS20085 (H8S71_20080) walR 3948420..3949127 (-) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29256.25 Da        Isoelectric Point: 5.8036

>NTDB_id=415120 H8S71_RS20065 WP_003242676.1 3943575..3944369(-) (vicX) [Bacillus subtilis subsp. subtilis strain ONU 559]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYSGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=415120 H8S71_RS20065 WP_003242676.1 3943575..3944369(-) (vicX) [Bacillus subtilis subsp. subtilis strain ONU 559]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCAATGGAGAC
GGTGAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTTTCCCACGATGCGGCGGAACCGATGTTTTATGTATTCC
ATTATAGCGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACCGGATGAAAGGCATTATCCGTTCAGCG
AATGTATTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGAAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCGTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCCGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACTGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB C0SP91

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53