Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | GQ601_RS10335 | Genome accession | NZ_CP047646 |
| Coordinates | 2174908..2175303 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain 19/Msa0875 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2169908..2180303
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GQ601_RS10310 (GQ601_10360) | - | 2171077..2171481 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| GQ601_RS10315 (GQ601_10365) | - | 2172134..2172367 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| GQ601_RS10320 (GQ601_10370) | murA | 2172478..2173743 (+) | 1266 | WP_000358009.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| GQ601_RS10325 (GQ601_10375) | fabZ | 2173777..2174217 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| GQ601_RS10330 (GQ601_10380) | - | 2174274..2174714 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| GQ601_RS10335 (GQ601_10385) | ssb | 2174908..2175303 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| GQ601_RS10340 (GQ601_10390) | sceD | 2175692..2176387 (+) | 696 | WP_000751995.1 | lytic transglycosylase SceD | - |
| GQ601_RS10345 (GQ601_10395) | tenA | 2176774..2177463 (+) | 690 | WP_000396068.1 | thiaminase II | - |
| GQ601_RS10350 (GQ601_10400) | thiD | 2177456..2178286 (+) | 831 | WP_000594965.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| GQ601_RS10355 (GQ601_10405) | thiM | 2178270..2179061 (+) | 792 | WP_001108486.1 | hydroxyethylthiazole kinase | - |
| GQ601_RS10360 (GQ601_10410) | thiE | 2179063..2179704 (+) | 642 | WP_000483161.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=414936 GQ601_RS10335 WP_000932694.1 2174908..2175303(+) (ssb) [Staphylococcus aureus strain 19/Msa0875]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=414936 GQ601_RS10335 WP_000932694.1 2174908..2175303(+) (ssb) [Staphylococcus aureus strain 19/Msa0875]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATACACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATACACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |