Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   GQ601_RS02640 Genome accession   NZ_CP047646
Coordinates   575738..576724 (-) Length   328 a.a.
NCBI ID   WP_212593139.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 19/Msa0875     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 570738..581724
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GQ601_RS02615 (GQ601_02630) - 570998..571345 (-) 348 WP_001242104.1 hypothetical protein -
  GQ601_RS02620 (GQ601_02635) - 571531..572124 (+) 594 WP_000224612.1 CYTH domain-containing protein -
  GQ601_RS02625 (GQ601_02640) - 572228..572593 (+) 366 WP_000214070.1 truncated hemoglobin YjbI -
  GQ601_RS02630 (GQ601_02645) yjbH 572616..573422 (+) 807 WP_000896697.1 protease adaptor protein YjbH -
  GQ601_RS02635 (GQ601_02650) pepF 573882..575690 (-) 1809 WP_000082727.1 oligoendopeptidase F -
  GQ601_RS02640 (GQ601_02655) coiA 575738..576724 (-) 987 WP_212593139.1 competence protein CoiA family protein Machinery gene
  GQ601_RS02645 (GQ601_02660) mecA 576845..577564 (-) 720 WP_001217731.1 adaptor protein MecA -
  GQ601_RS02650 (GQ601_02665) spxA 577935..578330 (-) 396 WP_000258003.1 transcriptional regulator SpxA -
  GQ601_RS02655 (GQ601_02670) trpS 578625..579614 (+) 990 WP_000448934.1 tryptophan--tRNA ligase -
  GQ601_RS02660 (GQ601_02675) - 579734..581356 (-) 1623 WP_000406183.1 peptide ABC transporter substrate-binding protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38816.36 Da        Isoelectric Point: 9.4277

>NTDB_id=414919 GQ601_RS02640 WP_212593139.1 575738..576724(-) (coiA) [Staphylococcus aureus strain 19/Msa0875]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNESIKHYKSKLILAQMIQQQGCKV
EIELFLKEIKQIPDILINNKYVIELQYSPISYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPITRKL
HTFNLEKKQIMMFQQIQYIGGHKYVAEKRNVKMSELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVHNYGYIFPEQIYIENHPIEWQLQVDLWLKNGESILVSDNLNYFKLKKFIVALESKTAIIEKLINNYLNISSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=414919 GQ601_RS02640 WP_212593139.1 575738..576724(-) (coiA) [Staphylococcus aureus strain 19/Msa0875]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGCGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAATCGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCTATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTTCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATATAGGCGGGCACAAATATGTCGCTGA
AAAAAGGAATGTCAAAATGAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAATTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAGAAAGCATATTAGTAAGTGACAATCTTAATTATTTTAAACTGAAAA
AGTTTATTGTTGCTCTAGAAAGTAAAACAGCGATTATAGAAAAACTTATTAACAATTATTTAAATATTAGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-308)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

95.732

100

0.957
  coiA Staphylococcus aureus MW2

95.732

100

0.957

Multiple sequence alignment