Detailed information NTG0414845

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: GNE05_RS02295
• Genome accession: NZ_CP047644
• Coordinates: 442909..444057 (+)
• Length: 382 a.a.
• NCBI ID: WP_014304340.1
• Uniprot ID: I2C1C2
• Organism: Bacillus sp. AM1(2019)
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 437909..449057

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GNE05_RS02275 (GNE05_02275)	-	438310..438993 (-)	684	WP_071181529.1	ABC transporter ATP-binding protein	-
GNE05_RS02280 (GNE05_02280)	-	439008..440441 (-)	1434	WP_061861849.1	ABC transporter permease	-
GNE05_RS02285 (GNE05_02285)	-	440654..441337 (+)	684	WP_014416901.1	response regulator transcription factor	-
GNE05_RS02290 (GNE05_02290)	-	441324..442751 (+)	1428	WP_100261600.1	HAMP domain-containing sensor histidine kinase	-
GNE05_RS02295 (GNE05_02295)	rapC	442909..444057 (+)	1149	WP_014304340.1	Rap family tetratricopeptide repeat protein	Regulator
GNE05_RS02300 (GNE05_02300)	phrC	444041..444160 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
GNE05_RS02305 (GNE05_02305)	-	444311..444406 (-)	96	WP_021495118.1	YjcZ family sporulation protein	-
GNE05_RS02310 (GNE05_02310)	-	444501..445865 (-)	1365	WP_045508518.1	aspartate kinase	-
GNE05_RS02315 (GNE05_02315)	ceuB	446278..447231 (+)	954	WP_014416904.1	ABC transporter permease	Machinery gene
GNE05_RS02320 (GNE05_02320)	-	447221..448168 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
GNE05_RS02325 (GNE05_02325)	-	448162..448920 (+)	759	WP_012116804.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45494.75 Da
• Isoelectric Point: 4.9939

>NTDB_id=414845 GNE05_RS02295 WP_014304340.1 442909..444057(+) (rapC) [Bacillus sp. AM1(2019)]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDRMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=414845 GNE05_RS02295 WP_014304340.1 442909..444057(+) (rapC) [Bacillus sp. AM1(2019)]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAAGCCGAGATCAAACAAGAGCTTGACCGTATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGT
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

• Tetratricopeptide repeat (TPR_12) (223-294)

3D structure

• AlphaFold DB: I2C1C2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.199	100	0.822
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568