Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | GTW26_RS26805 | Genome accession | NZ_CP047643 |
| Coordinates | 5671827..5672351 (+) | Length | 174 a.a. |
| NCBI ID | WP_003116261.1 | Uniprot ID | Q7WZP2 |
| Organism | Pseudomonas aeruginosa CI27 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5666827..5677351
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GTW26_RS26785 (GTW26_26720) | pilR | 5668089..5669426 (+) | 1338 | WP_003094694.1 | two-component system response regulator PilR | Regulator |
| GTW26_RS26790 (GTW26_26725) | thiO | 5669472..5670566 (-) | 1095 | WP_003141551.1 | glycine oxidase ThiO | - |
| GTW26_RS26795 (GTW26_26730) | - | 5670706..5671206 (+) | 501 | WP_016254062.1 | GspH/FimT family pseudopilin | - |
| GTW26_RS26800 (GTW26_26735) | - | 5671329..5671817 (+) | 489 | WP_003141552.1 | GspH/FimT family pseudopilin | - |
| GTW26_RS26805 (GTW26_26740) | pilV | 5671827..5672351 (+) | 525 | WP_003116261.1 | type IV pilus modification protein PilV | Machinery gene |
| GTW26_RS26810 (GTW26_26745) | - | 5672360..5673175 (+) | 816 | WP_016254061.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| GTW26_RS26815 (GTW26_26750) | - | 5673172..5673777 (+) | 606 | WP_003116263.1 | pilus assembly protein | - |
| GTW26_RS26820 (GTW26_26755) | - | 5673791..5677267 (+) | 3477 | WP_003141555.1 | type IV pilus biogenesis factor PilY1 | - |
Sequence
Protein
Download Length: 174 a.a. Molecular weight: 18763.51 Da Isoelectric Point: 4.9113
>NTDB_id=414828 GTW26_RS26805 WP_003116261.1 5671827..5672351(+) (pilV) [Pseudomonas aeruginosa CI27]
MSRETGFSMIEVLVALVLISIGVLGMVAMQGRTIQYTQESVQRNAAAMLASDLMEIMRADPDAVLNLRAQLREDSVYYKA
KGSDFPAAPARCAPLPADAKERLGCWAQQASKDLPGASALLNSQFYICRSPTPGTCDNTKGSAIEIQVAWRAMDGACFNA
SDSTLCTYSVRSEL
MSRETGFSMIEVLVALVLISIGVLGMVAMQGRTIQYTQESVQRNAAAMLASDLMEIMRADPDAVLNLRAQLREDSVYYKA
KGSDFPAAPARCAPLPADAKERLGCWAQQASKDLPGASALLNSQFYICRSPTPGTCDNTKGSAIEIQVAWRAMDGACFNA
SDSTLCTYSVRSEL
Nucleotide
Download Length: 525 bp
>NTDB_id=414828 GTW26_RS26805 WP_003116261.1 5671827..5672351(+) (pilV) [Pseudomonas aeruginosa CI27]
ATGTCTCGAGAAACGGGTTTCAGCATGATCGAAGTACTGGTTGCTCTGGTGCTGATCAGCATTGGCGTACTGGGCATGGT
TGCCATGCAAGGGCGCACGATCCAGTACACGCAGGAGTCGGTACAACGCAATGCCGCAGCAATGCTTGCTAGCGACCTGA
TGGAAATAATGCGTGCGGACCCAGATGCCGTACTCAATCTACGCGCCCAACTACGCGAAGACTCGGTCTACTACAAGGCC
AAGGGCAGCGACTTTCCCGCAGCCCCAGCGCGCTGCGCGCCATTGCCAGCAGATGCTAAGGAACGTCTCGGCTGCTGGGC
CCAACAGGCCTCGAAAGACTTGCCGGGAGCCTCCGCACTCTTGAATAGCCAATTCTACATTTGTCGCAGCCCAACCCCGG
GTACCTGCGACAACACCAAAGGCTCGGCCATCGAAATCCAGGTTGCCTGGCGAGCCATGGATGGAGCGTGTTTCAACGCC
TCTGACTCCACCTTGTGCACCTACAGCGTCCGCTCCGAATTGTGA
ATGTCTCGAGAAACGGGTTTCAGCATGATCGAAGTACTGGTTGCTCTGGTGCTGATCAGCATTGGCGTACTGGGCATGGT
TGCCATGCAAGGGCGCACGATCCAGTACACGCAGGAGTCGGTACAACGCAATGCCGCAGCAATGCTTGCTAGCGACCTGA
TGGAAATAATGCGTGCGGACCCAGATGCCGTACTCAATCTACGCGCCCAACTACGCGAAGACTCGGTCTACTACAAGGCC
AAGGGCAGCGACTTTCCCGCAGCCCCAGCGCGCTGCGCGCCATTGCCAGCAGATGCTAAGGAACGTCTCGGCTGCTGGGC
CCAACAGGCCTCGAAAGACTTGCCGGGAGCCTCCGCACTCTTGAATAGCCAATTCTACATTTGTCGCAGCCCAACCCCGG
GTACCTGCGACAACACCAAAGGCTCGGCCATCGAAATCCAGGTTGCCTGGCGAGCCATGGATGGAGCGTGTTTCAACGCC
TCTGACTCCACCTTGTGCACCTACAGCGTCCGCTCCGAATTGTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
59.429 |
100 |
0.598 |