Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   GU334_RS11625 Genome accession   NZ_CP047628
Coordinates   2359285..2360523 (-) Length   412 a.a.
NCBI ID   WP_167841683.1    Uniprot ID   -
Organism   Lactococcus raffinolactis strain Lr_19_14     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 2354285..2365523
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GU334_RS11605 (GU334_11565) - 2355197..2357029 (-) 1833 WP_061774537.1 C47 family peptidase -
  GU334_RS11610 (GU334_11570) - 2357076..2357819 (-) 744 WP_167841632.1 hypothetical protein -
  GU334_RS11615 (GU334_11575) - 2357830..2358252 (-) 423 WP_167841633.1 hypothetical protein -
  GU334_RS11620 (GU334_11580) - 2358486..2359235 (+) 750 WP_138492296.1 AraC family transcriptional regulator -
  GU334_RS11625 (GU334_11585) eeP 2359285..2360523 (-) 1239 WP_167841683.1 RIP metalloprotease RseP Regulator
  GU334_RS11630 (GU334_11590) dxr 2360628..2361803 (-) 1176 WP_167841634.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  GU334_RS11635 (GU334_11595) - 2361908..2362702 (-) 795 WP_061774543.1 phosphatidate cytidylyltransferase -
  GU334_RS11640 (GU334_11600) - 2362699..2363445 (-) 747 WP_061774544.1 isoprenyl transferase -
  GU334_RS11645 (GU334_11605) yajC 2363658..2364014 (-) 357 WP_061774545.1 preprotein translocase subunit YajC -
  GU334_RS11650 (GU334_11610) - 2364213..2364959 (+) 747 WP_061774546.1 DUF975 family protein -

Sequence


Protein


Download         Length: 412 a.a.        Molecular weight: 45195.76 Da        Isoelectric Point: 6.7654

>NTDB_id=414713 GU334_RS11625 WP_167841683.1 2359285..2360523(-) (eeP) [Lactococcus raffinolactis strain Lr_19_14]
MQSLVTFIIIFGIIVCVHEYGHLFFAKKSGILVREFSIGMGPKIYAHQAKDGTLYTIRMLPLGGYVRMAGWGEDETEIKT
GAPVSLTLDVQNQTVTRINLSDKVQFGQALPMLVTAYDFEKALIITGEVNGEVVTYAVAHDATVVEEDGTELRIAPLDVQ
YQSASLPGRMMTNFAGPLNNFILGVVAFVLVAFMQGGVQDLNTNQITVSDHNLPAYQAGLRTGDKVETINDVPVSDWSSL
SKQIGESDGKAIQVKTDRKTLTITPKKQEKSYIIGITPFLKTGFVDKLTGGLKEAWTSAFAIINALKDLILHPDINKLGG
PVAMYRMSGDAAREGITTVIRFMALLSINLGIFNLIPIPALDGGKIVMNIIEAIRRKPMKQEYESIITLVGVGIMVVLMI
AVTWNDIWRLFR

Nucleotide


Download         Length: 1239 bp        

>NTDB_id=414713 GU334_RS11625 WP_167841683.1 2359285..2360523(-) (eeP) [Lactococcus raffinolactis strain Lr_19_14]
GTGCAAAGTTTAGTCACATTTATCATCATTTTCGGTATTATTGTTTGTGTCCATGAGTATGGTCACCTGTTTTTTGCTAA
AAAATCAGGGATTTTGGTGCGAGAATTTTCGATTGGTATGGGACCGAAAATCTATGCACATCAAGCTAAAGATGGCACCC
TTTATACCATTAGAATGTTACCTCTGGGTGGTTATGTTCGCATGGCTGGCTGGGGTGAAGATGAAACTGAGATTAAAACT
GGTGCACCTGTGAGCTTGACATTAGATGTCCAAAATCAGACGGTGACACGCATCAATCTCAGTGATAAAGTGCAGTTTGG
TCAAGCGCTTCCGATGCTTGTCACAGCTTACGACTTCGAAAAGGCTTTAATCATTACCGGGGAGGTCAATGGGGAAGTCG
TGACGTATGCGGTGGCTCATGATGCGACGGTTGTTGAGGAAGATGGTACAGAGCTGCGCATTGCGCCTTTAGATGTGCAA
TATCAGAGTGCGAGTCTGCCTGGTCGAATGATGACGAACTTTGCAGGACCGCTCAATAACTTTATTTTGGGCGTGGTGGC
TTTTGTTCTGGTTGCCTTTATGCAAGGTGGCGTGCAAGATTTGAATACCAATCAAATCACGGTGTCTGATCACAATTTAC
CGGCTTATCAGGCTGGTTTACGGACGGGTGATAAAGTTGAGACGATTAATGATGTGCCAGTTTCTGATTGGTCTAGCTTA
TCAAAACAAATCGGTGAATCAGATGGTAAGGCCATTCAAGTTAAGACGGACCGCAAAACACTGACGATTACGCCTAAGAA
ACAAGAGAAAAGTTATATTATCGGGATTACGCCGTTTTTAAAAACAGGATTTGTAGATAAGTTAACAGGTGGTCTTAAAG
AGGCGTGGACGTCTGCTTTTGCGATTATTAATGCTTTGAAAGATTTAATTTTACATCCAGATATTAATAAATTAGGTGGA
CCAGTTGCCATGTATCGGATGTCTGGTGATGCGGCGCGTGAGGGTATCACGACGGTTATCAGATTTATGGCACTTTTATC
CATTAACTTAGGAATTTTCAATCTGATTCCGATTCCTGCCCTGGATGGTGGTAAGATTGTCATGAATATCATTGAAGCGA
TTCGTCGTAAACCGATGAAACAAGAATATGAAAGTATCATTACTCTTGTAGGTGTGGGCATCATGGTTGTCTTGATGATT
GCGGTGACTTGGAATGATATTTGGCGGTTGTTTCGGTAA

Domains


Predicted by InterproScan.

(6-398)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

61.045

100

0.624

  eeP Streptococcus thermophilus LMD-9

60.808

100

0.621


Multiple sequence alignment