Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | GUU85_RS02580 | Genome accession | NZ_CP047588 |
| Coordinates | 556577..557092 (-) | Length | 171 a.a. |
| NCBI ID | WP_163119655.1 | Uniprot ID | - |
| Organism | Buchnera aphidicola (Uroleucon sonchi) strain UsonBac | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 551577..562092
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GUU85_RS02560 (GUU85_02560) | - | 551918..553144 (-) | 1227 | WP_163119651.1 | phosphopentomutase | - |
| GUU85_RS02565 (GUU85_02565) | - | 553204..554796 (-) | 1593 | WP_163119652.1 | peptide chain release factor 3 | - |
| GUU85_RS02570 (GUU85_02570) | - | 555046..555624 (-) | 579 | WP_163119653.1 | NfuA family Fe-S biogenesis protein | - |
| GUU85_RS02575 (GUU85_02575) | bioH | 555738..556508 (+) | 771 | WP_163119654.1 | pimeloyl-ACP methyl ester esterase BioH | - |
| GUU85_RS02580 (GUU85_02580) | ssb | 556577..557092 (-) | 516 | WP_163119655.1 | single-stranded DNA-binding protein | Machinery gene |
| GUU85_RS02585 (GUU85_02585) | dnaB | 557614..559011 (+) | 1398 | WP_163119656.1 | replicative DNA helicase | - |
| GUU85_RS02590 (GUU85_02590) | gshB | 559251..560207 (+) | 957 | WP_163119658.1 | glutathione synthase | - |
| GUU85_RS02595 (GUU85_02595) | ruvX | 560224..560643 (+) | 420 | WP_163119660.1 | Holliday junction resolvase RuvX | - |
| GUU85_RS02600 (GUU85_02600) | hemW | 560864..561994 (+) | 1131 | WP_163119668.1 | radical SAM family heme chaperone HemW | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19385.70 Da Isoelectric Point: 6.2310
>NTDB_id=414343 GUU85_RS02580 WP_163119655.1 556577..557092(-) (ssb) [Buchnera aphidicola (Uroleucon sonchi) strain UsonBac]
MASRGVNKVILIGHLGQDPEVRYMPNGNAVVNMTLATSENWKDKNTGENKEKTEWHRIVLFGKLAEIAGEYLRKGSQIYI
EGALQTRKWQDQNGIERYTTEVIVNIGGTMQMLGSRNIHLQNLSTQENNHSEEKIKKTDQVDFKKGLTSHNSTTDLVHNS
AEIDFDDDIPF
MASRGVNKVILIGHLGQDPEVRYMPNGNAVVNMTLATSENWKDKNTGENKEKTEWHRIVLFGKLAEIAGEYLRKGSQIYI
EGALQTRKWQDQNGIERYTTEVIVNIGGTMQMLGSRNIHLQNLSTQENNHSEEKIKKTDQVDFKKGLTSHNSTTDLVHNS
AEIDFDDDIPF
Nucleotide
Download Length: 516 bp
>NTDB_id=414343 GUU85_RS02580 WP_163119655.1 556577..557092(-) (ssb) [Buchnera aphidicola (Uroleucon sonchi) strain UsonBac]
ATGGCTAGTCGAGGCGTAAATAAAGTTATTTTAATTGGGCATTTAGGTCAAGATCCTGAAGTGCGTTATATGCCAAATGG
TAATGCAGTAGTTAATATGACATTAGCGACTTCAGAAAATTGGAAAGATAAAAATACAGGAGAAAATAAAGAAAAAACAG
AATGGCATAGAATAGTATTATTTGGTAAATTAGCGGAAATTGCAGGAGAATATCTTCGAAAAGGTTCTCAAATATACATT
GAAGGAGCTTTACAAACAAGAAAATGGCAAGATCAAAATGGCATTGAGCGTTATACTACAGAGGTTATTGTAAATATTGG
TGGTACTATGCAAATGTTAGGTAGTCGAAACATTCATTTACAAAATTTATCAACTCAAGAAAATAATCATTCTGAAGAAA
AAATAAAAAAAACAGATCAAGTAGATTTTAAAAAAGGTTTAACCTCACATAACTCAACAACGGATCTTGTTCATAATTCT
GCAGAAATAGATTTTGATGATGACATTCCTTTTTAA
ATGGCTAGTCGAGGCGTAAATAAAGTTATTTTAATTGGGCATTTAGGTCAAGATCCTGAAGTGCGTTATATGCCAAATGG
TAATGCAGTAGTTAATATGACATTAGCGACTTCAGAAAATTGGAAAGATAAAAATACAGGAGAAAATAAAGAAAAAACAG
AATGGCATAGAATAGTATTATTTGGTAAATTAGCGGAAATTGCAGGAGAATATCTTCGAAAAGGTTCTCAAATATACATT
GAAGGAGCTTTACAAACAAGAAAATGGCAAGATCAAAATGGCATTGAGCGTTATACTACAGAGGTTATTGTAAATATTGG
TGGTACTATGCAAATGTTAGGTAGTCGAAACATTCATTTACAAAATTTATCAACTCAAGAAAATAATCATTCTGAAGAAA
AAATAAAAAAAACAGATCAAGTAGATTTTAAAAAAGGTTTAACCTCACATAACTCAACAACGGATCTTGTTCATAATTCT
GCAGAAATAGATTTTGATGATGACATTCCTTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
57.542 |
100 |
0.602 |
| ssb | Glaesserella parasuis strain SC1401 |
46.409 |
100 |
0.491 |
| ssb | Neisseria meningitidis MC58 |
45.455 |
100 |
0.468 |
| ssb | Neisseria gonorrhoeae MS11 |
45.455 |
100 |
0.468 |