Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   GRX76_RS01615 Genome accession   NZ_CP047569
Coordinates   429634..430029 (-) Length   131 a.a.
NCBI ID   WP_160151701.1    Uniprot ID   -
Organism   Microbulbifer sp. ALW1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 424634..435029
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GRX76_RS01600 - 426008..428176 (-) 2169 WP_160151698.1 methyl-accepting chemotaxis protein -
  GRX76_RS01605 - 428467..429009 (-) 543 WP_160151699.1 chemotaxis protein CheW -
  GRX76_RS01610 pilH 429028..429390 (-) 363 WP_160151700.1 twitching motility response regulator PilH -
  GRX76_RS01615 pilG 429634..430029 (-) 396 WP_160151701.1 twitching motility response regulator PilG Regulator
  GRX76_RS01620 gshB 430427..431383 (+) 957 WP_160151702.1 glutathione synthase -
  GRX76_RS01625 - 431495..432424 (+) 930 WP_160151703.1 energy transducer TonB -
  GRX76_RS01630 - 432487..433077 (+) 591 WP_236250506.1 YqgE/AlgH family protein -
  GRX76_RS01635 ruvX 433092..433517 (+) 426 WP_160151704.1 Holliday junction resolvase RuvX -
  GRX76_RS01640 hemC 433574..434518 (+) 945 WP_160151705.1 hydroxymethylbilane synthase -

Sequence

Protein


Download         Length: 131 a.a.        Molecular weight: 14346.57 Da        Isoelectric Point: 7.2147

>NTDB_id=414207 GRX76_RS01615 WP_160151701.1 429634..430029(-) (pilG) [Microbulbifer sp. ALW1]
MELNWESLTVMVIDDSKTIRRTAETLLQKAGCSVVTATDGFDALAKIADSRPDIIFVDIMMPRLDGYQTCALIKNNSEFR
STPVIMLSSKDGLFDKAKGRVVGCDQYLTKPFSKSELLGAISAHAKPHHAA

Nucleotide


Download         Length: 396 bp        

>NTDB_id=414207 GRX76_RS01615 WP_160151701.1 429634..430029(-) (pilG) [Microbulbifer sp. ALW1]
ATGGAGCTCAACTGGGAAAGTCTCACCGTGATGGTGATCGACGACAGTAAAACCATTCGTCGCACTGCGGAAACGCTGCT
GCAAAAAGCAGGCTGTTCTGTAGTTACCGCTACCGATGGCTTCGACGCTTTGGCAAAAATCGCCGATTCGCGTCCGGATA
TTATTTTTGTAGACATCATGATGCCGCGTCTCGATGGCTATCAGACCTGCGCGTTAATCAAGAACAACAGCGAATTCCGC
AGCACGCCGGTGATCATGTTGTCCAGTAAGGATGGTCTGTTCGACAAGGCCAAGGGGCGTGTGGTTGGGTGCGATCAATA
TTTGACCAAGCCCTTCAGCAAAAGCGAATTGCTTGGTGCAATTTCTGCTCACGCCAAACCACATCACGCGGCTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75

94.656

0.71
  vicR Streptococcus mutans UA159

41.88

89.313

0.374

Multiple sequence alignment