Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptA   Type   Regulator
Locus tag   HMPREF0833_RS09875 Genome accession   NC_015678
Coordinates   2091538..2092269 (+) Length   243 a.a.
NCBI ID   WP_013904732.1    Uniprot ID   -
Organism   Streptococcus parasanguinis ATCC 15912     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 2086538..2097269
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HMPREF0833_RS09845 (HMPREF0833_11962) - 2086933..2088354 (+) 1422 WP_003018462.1 NCS2 family permease -
  HMPREF0833_RS09850 (HMPREF0833_11963) tsaE 2088547..2089002 (+) 456 WP_003018467.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  HMPREF0833_RS09855 (HMPREF0833_11964) - 2088995..2089525 (+) 531 WP_013904730.1 GNAT family N-acetyltransferase -
  HMPREF0833_RS09860 (HMPREF0833_11965) brpA 2089539..2090732 (+) 1194 WP_013904731.1 biofilm formation/cell division transcriptional regulator BrpA -
  HMPREF0833_RS09865 (HMPREF0833_11966) - 2090754..2091044 (-) 291 WP_003018523.1 hypothetical protein -
  HMPREF0833_RS09870 (HMPREF0833_11967) - 2091057..2091470 (-) 414 WP_003018459.1 HIT family protein -
  HMPREF0833_RS09875 (HMPREF0833_11968) pptA 2091538..2092269 (+) 732 WP_013904732.1 ABC transporter ATP-binding protein Regulator
  HMPREF0833_RS09880 (HMPREF0833_11969) - 2092266..2093321 (+) 1056 WP_013904733.1 ABC transporter permease -
  HMPREF0833_RS09885 (HMPREF0833_11970) ccrZ 2093362..2094156 (+) 795 WP_003003852.1 cell cycle regulator CcrZ -
  HMPREF0833_RS09890 (HMPREF0833_11971) trmB 2094153..2094788 (+) 636 WP_013904735.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  HMPREF0833_RS09895 (HMPREF0833_11972) rimP 2094886..2095365 (+) 480 WP_003003953.1 ribosome maturation factor RimP -
  HMPREF0833_RS09900 (HMPREF0833_11973) nusA 2095410..2096552 (+) 1143 WP_013904736.1 transcription termination factor NusA -
  HMPREF0833_RS09905 (HMPREF0833_11974) rnpM 2096567..2096863 (+) 297 WP_003010401.1 RNase P modulator RnpM -
  HMPREF0833_RS09910 (HMPREF0833_11975) - 2096856..2097155 (+) 300 WP_003010399.1 YlxQ-related RNA-binding protein -

Sequence


Protein


Download         Length: 243 a.a.        Molecular weight: 26951.16 Da        Isoelectric Point: 4.4500

>NTDB_id=41416 HMPREF0833_RS09875 WP_013904732.1 2091538..2092269(+) (pptA) [Streptococcus parasanguinis ATCC 15912]
MLEINKLTGGYVNIPVLKEVSFSVPDGQLIGLIGLNGAGKSTTINEIIGLLHPYAGEVRIDGLSLPEAPTDYRKKIGYIP
ETPSLYEELTLREHIETVAMAYDLDMDQVMGRVQPLLERFRLAEKLDWFPTQFSKGMKQKVMIICAYAVDPSLYIVDEPF
LGLDPVAIADLIQLLADEKAKGKSILMSTHVLDSAEKMCDGFVILHKGQIRAQGTLDELRSTFGDEKASLNDIYMTLTEE
ETA

Nucleotide


Download         Length: 732 bp        

>NTDB_id=41416 HMPREF0833_RS09875 WP_013904732.1 2091538..2092269(+) (pptA) [Streptococcus parasanguinis ATCC 15912]
ATGTTAGAAATCAACAAGTTGACAGGGGGCTATGTCAACATCCCTGTCCTGAAAGAGGTGAGTTTTTCAGTTCCGGATGG
CCAACTGATTGGTTTGATTGGACTAAATGGAGCTGGGAAGTCAACCACGATTAATGAAATTATTGGTCTCCTGCATCCTT
ATGCTGGGGAAGTACGGATTGACGGCCTGAGCCTTCCAGAAGCTCCAACTGACTATCGTAAAAAAATCGGCTATATTCCA
GAAACCCCTAGTCTATATGAAGAATTAACCTTGAGAGAGCATATCGAGACCGTAGCTATGGCCTATGATTTAGACATGGA
TCAGGTCATGGGGCGCGTCCAGCCCTTGTTGGAACGATTTCGTTTGGCTGAAAAATTAGATTGGTTCCCGACCCAGTTTT
CAAAAGGGATGAAGCAAAAGGTCATGATTATTTGCGCCTATGCAGTGGATCCAAGTCTTTATATTGTCGATGAACCCTTT
TTGGGATTGGATCCTGTTGCGATTGCAGATTTGATTCAGTTATTGGCAGATGAGAAAGCAAAAGGAAAATCGATTTTGAT
GAGTACCCACGTTCTGGATTCGGCTGAAAAGATGTGTGATGGTTTTGTAATCCTCCATAAGGGTCAGATCCGAGCACAAG
GGACCTTAGATGAGTTGCGTTCAACTTTTGGAGATGAGAAAGCAAGTCTAAATGATATCTACATGACCTTGACAGAAGAG
GAAACAGCATGA

Domains


Predicted by InterproScan.

(17-160)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

75.934

99.177

0.753

  pptA Streptococcus salivarius strain HSISS4

75.519

99.177

0.749


Multiple sequence alignment