Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | HMPREF0833_RS06655 | Genome accession | NC_015678 |
| Coordinates | 1446441..1448870 (-) | Length | 809 a.a. |
| NCBI ID | WP_013904284.1 | Uniprot ID | I1ZPE9 |
| Organism | Streptococcus parasanguinis ATCC 15912 | ||
| Function | degradation of ComW (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1441441..1453870
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HMPREF0833_RS06625 (HMPREF0833_11351) | - | 1441608..1442384 (-) | 777 | WP_003015125.1 | NUDIX hydrolase | - |
| HMPREF0833_RS06630 (HMPREF0833_11352) | pnuC | 1442385..1443167 (-) | 783 | WP_041818385.1 | nicotinamide riboside transporter PnuC | - |
| HMPREF0833_RS06635 (HMPREF0833_11353) | - | 1443178..1444239 (-) | 1062 | WP_013904281.1 | AAA family ATPase | - |
| HMPREF0833_RS06640 (HMPREF0833_11354) | - | 1444404..1445117 (-) | 714 | WP_003015121.1 | hypothetical protein | - |
| HMPREF0833_RS06645 (HMPREF0833_11355) | - | 1445558..1445965 (-) | 408 | WP_013904282.1 | DUF4430 domain-containing protein | - |
| HMPREF0833_RS06650 (HMPREF0833_11356) | - | 1445943..1446431 (-) | 489 | WP_013904283.1 | hypothetical protein | - |
| HMPREF0833_RS06655 (HMPREF0833_11357) | clpC | 1446441..1448870 (-) | 2430 | WP_013904284.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| HMPREF0833_RS06660 (HMPREF0833_11358) | - | 1448871..1449335 (-) | 465 | WP_003002068.1 | CtsR family transcriptional regulator | - |
| HMPREF0833_RS06665 (HMPREF0833_11359) | - | 1449709..1453419 (-) | 3711 | WP_013904285.1 | alpha-L-fucosidase | - |
Sequence
Protein
Download Length: 809 a.a. Molecular weight: 89742.20 Da Isoelectric Point: 5.3454
>NTDB_id=41389 HMPREF0833_RS06655 WP_013904284.1 1446441..1448870(-) (clpC) [Streptococcus parasanguinis ATCC 15912]
MNYSTALLESIEAAQILAGHYQGHTLDTWHLLTAMANNPYSVAGSVLNDYPMQIDEFQDAAEHITGQAFQSDNRYEIFPF
SYRMEAIMKHAREIAQVLHAKTLGTEHVLLSLLADRGTLASQVMEFAGFAFTEQDKGVPIASLRKNLEDKAGWDKNDIKA
IRSLYRAQNPNRQTMGNMMGMPPSTSGGLEDYTRDLTEMARAGQIEPVIGRDAEISRMIQILSRKTKNNPVLVGEAGVGK
TALALGLAQRVASGNVPAEIAQMRVLELDLMNVVAGTRFRGDFEERMNNIIQDIEEDGHVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQDEYQKHIEKDAALSRRFAKVTIEEPSVADSIQILQGLKETYQDHHHVTITDEAIET
AVKYAHRYLTSRQLPDSAIDLLDEAAATVQNRDSNGHVKEELTALDRALMDGKWKKAAQLLEVEAAPIVYKKEVTDQDVL
VTLSQLSGIPTQKLTQTDAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSNKRPIGSFMFLGPTGVGKTELAKA
LAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKIDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQANMEKRMFEELKKTYRPEFINRIDEKVVFHSLSSE
DMQQVVKVMVKPLIATLAEQDMTLKFQPSALKLLATKGYDPEMGARPLRRVLQTEVEDQLAELLLKGQAQEGQTIKVGTT
AGTIKFEIV
MNYSTALLESIEAAQILAGHYQGHTLDTWHLLTAMANNPYSVAGSVLNDYPMQIDEFQDAAEHITGQAFQSDNRYEIFPF
SYRMEAIMKHAREIAQVLHAKTLGTEHVLLSLLADRGTLASQVMEFAGFAFTEQDKGVPIASLRKNLEDKAGWDKNDIKA
IRSLYRAQNPNRQTMGNMMGMPPSTSGGLEDYTRDLTEMARAGQIEPVIGRDAEISRMIQILSRKTKNNPVLVGEAGVGK
TALALGLAQRVASGNVPAEIAQMRVLELDLMNVVAGTRFRGDFEERMNNIIQDIEEDGHVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQDEYQKHIEKDAALSRRFAKVTIEEPSVADSIQILQGLKETYQDHHHVTITDEAIET
AVKYAHRYLTSRQLPDSAIDLLDEAAATVQNRDSNGHVKEELTALDRALMDGKWKKAAQLLEVEAAPIVYKKEVTDQDVL
VTLSQLSGIPTQKLTQTDAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSNKRPIGSFMFLGPTGVGKTELAKA
LAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKIDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQANMEKRMFEELKKTYRPEFINRIDEKVVFHSLSSE
DMQQVVKVMVKPLIATLAEQDMTLKFQPSALKLLATKGYDPEMGARPLRRVLQTEVEDQLAELLLKGQAQEGQTIKVGTT
AGTIKFEIV
Nucleotide
Download Length: 2430 bp
>NTDB_id=41389 HMPREF0833_RS06655 WP_013904284.1 1446441..1448870(-) (clpC) [Streptococcus parasanguinis ATCC 15912]
ATGAACTATTCAACAGCACTGTTAGAAAGTATAGAAGCGGCCCAAATACTAGCAGGCCACTATCAGGGGCATACCTTAGA
TACTTGGCATCTCCTGACGGCTATGGCCAATAATCCCTATAGCGTGGCAGGTTCTGTACTGAACGATTATCCTATGCAGA
TCGATGAGTTTCAGGATGCAGCGGAGCATATTACAGGTCAAGCTTTTCAAAGCGACAATCGGTATGAAATCTTCCCATTT
TCTTATCGGATGGAAGCGATTATGAAGCACGCAAGAGAGATTGCCCAGGTCCTTCATGCCAAGACTTTGGGAACAGAGCA
TGTGCTCCTCTCTCTTCTAGCAGACCGTGGGACCTTGGCTAGCCAAGTCATGGAGTTTGCCGGCTTTGCCTTTACAGAGC
AAGACAAGGGAGTTCCTATTGCCTCCCTTCGCAAGAATTTAGAAGACAAGGCAGGCTGGGACAAGAATGATATCAAAGCC
ATTCGGAGTCTTTATCGGGCTCAAAACCCTAACCGCCAAACCATGGGAAATATGATGGGCATGCCCCCAAGCACCAGTGG
AGGTCTTGAAGATTATACCCGTGATTTGACAGAAATGGCGCGGGCAGGCCAGATTGAGCCTGTGATCGGCCGGGATGCAG
AGATTTCACGCATGATCCAAATCCTCAGCCGCAAGACGAAGAACAATCCTGTATTGGTGGGAGAAGCAGGGGTCGGGAAA
ACCGCCCTTGCATTAGGTCTGGCCCAGCGTGTCGCTAGTGGCAATGTTCCAGCTGAAATCGCACAAATGCGTGTCCTGGA
ATTGGATCTCATGAATGTCGTTGCAGGGACGCGCTTCCGTGGAGACTTCGAAGAACGGATGAACAATATCATCCAGGACA
TCGAAGAAGACGGTCACGTGATTCTCTTTATCGATGAACTGCATACCATTATGGGGTCAGGATCCGGCATTGATTCGACC
CTAGACGCAGCCAATATTCTAAAACCAGCCTTGGCACGAGGAACCTTGCGTACAGTTGGAGCAACGACCCAAGATGAGTA
CCAAAAGCATATCGAAAAAGATGCAGCCCTCTCTCGGCGTTTTGCGAAAGTCACCATTGAAGAGCCAAGTGTTGCAGATA
GCATCCAAATTCTCCAAGGCTTGAAAGAGACCTATCAGGACCACCATCATGTGACCATTACTGATGAAGCGATCGAAACA
GCTGTCAAATATGCCCACCGCTATTTGACCAGCCGTCAATTGCCAGATTCAGCCATTGATCTCTTGGATGAAGCGGCAGC
TACCGTACAAAACCGCGATTCCAACGGTCATGTAAAAGAAGAGTTGACCGCCTTGGATCGGGCCTTGATGGATGGCAAGT
GGAAGAAAGCAGCCCAACTCTTAGAAGTAGAGGCCGCTCCCATTGTCTACAAAAAAGAAGTCACTGACCAAGATGTCTTG
GTGACCTTGAGCCAATTATCGGGTATTCCAACTCAAAAACTGACCCAAACCGATGCCAAGAAGTACCTAAACTTAGAAGC
AGAATTGCACAAGCGCGTGATTGGTCAAGACCAAGCCGTTTCGAGTATCAGTCGGGCTATTCGACGCAATCAATCAGGTA
TTCGTAGCAATAAACGTCCGATCGGTTCTTTCATGTTCCTAGGACCTACCGGTGTCGGAAAAACAGAGCTAGCCAAAGCT
TTGGCAGAAGTTCTGTTTGATGATGAATCGGCCCTCATCCGTTTTGATATGAGTGAGTACATGGAAAAATTTGCGGCTAG
CCGCCTCAACGGTGCCCCTCCAGGCTATGTGGGCTACGAAGAAGGAGGCGAATTGACCGAGAAAGTTCGCAACAAACCAT
ATTCAGTTCTCTTATTTGATGAGGTGGAAAAAGCCCACCCAGATATTTTTAATGTCCTTTTGCAAGTCTTGGATGACGGA
GTCTTAACCGATAGCAAAGGCCGGAAGATTGATTTCTCCAATACCATTATCATCATGACCTCAAATCTGGGAGCAACAGC
CCTTCGGGATGATAAGACAGTTGGCTTTGGTGCCAAAGATATTCGCTTTGATCAGGCCAATATGGAAAAACGCATGTTTG
AAGAGTTGAAGAAGACCTATCGTCCAGAGTTTATCAACCGGATTGATGAAAAGGTGGTCTTCCATAGTCTCTCAAGCGAG
GACATGCAGCAGGTGGTGAAAGTCATGGTCAAACCGCTCATCGCGACCTTGGCCGAACAAGACATGACTCTCAAATTCCA
GCCTTCAGCGCTCAAGTTGCTAGCAACCAAAGGCTACGATCCAGAAATGGGAGCTCGCCCACTGCGTCGTGTCTTGCAGA
CCGAAGTGGAAGATCAACTAGCAGAGCTATTGCTGAAAGGGCAAGCCCAAGAAGGGCAAACCATCAAGGTTGGAACGACA
GCCGGAACGATCAAGTTCGAGATTGTCTAG
ATGAACTATTCAACAGCACTGTTAGAAAGTATAGAAGCGGCCCAAATACTAGCAGGCCACTATCAGGGGCATACCTTAGA
TACTTGGCATCTCCTGACGGCTATGGCCAATAATCCCTATAGCGTGGCAGGTTCTGTACTGAACGATTATCCTATGCAGA
TCGATGAGTTTCAGGATGCAGCGGAGCATATTACAGGTCAAGCTTTTCAAAGCGACAATCGGTATGAAATCTTCCCATTT
TCTTATCGGATGGAAGCGATTATGAAGCACGCAAGAGAGATTGCCCAGGTCCTTCATGCCAAGACTTTGGGAACAGAGCA
TGTGCTCCTCTCTCTTCTAGCAGACCGTGGGACCTTGGCTAGCCAAGTCATGGAGTTTGCCGGCTTTGCCTTTACAGAGC
AAGACAAGGGAGTTCCTATTGCCTCCCTTCGCAAGAATTTAGAAGACAAGGCAGGCTGGGACAAGAATGATATCAAAGCC
ATTCGGAGTCTTTATCGGGCTCAAAACCCTAACCGCCAAACCATGGGAAATATGATGGGCATGCCCCCAAGCACCAGTGG
AGGTCTTGAAGATTATACCCGTGATTTGACAGAAATGGCGCGGGCAGGCCAGATTGAGCCTGTGATCGGCCGGGATGCAG
AGATTTCACGCATGATCCAAATCCTCAGCCGCAAGACGAAGAACAATCCTGTATTGGTGGGAGAAGCAGGGGTCGGGAAA
ACCGCCCTTGCATTAGGTCTGGCCCAGCGTGTCGCTAGTGGCAATGTTCCAGCTGAAATCGCACAAATGCGTGTCCTGGA
ATTGGATCTCATGAATGTCGTTGCAGGGACGCGCTTCCGTGGAGACTTCGAAGAACGGATGAACAATATCATCCAGGACA
TCGAAGAAGACGGTCACGTGATTCTCTTTATCGATGAACTGCATACCATTATGGGGTCAGGATCCGGCATTGATTCGACC
CTAGACGCAGCCAATATTCTAAAACCAGCCTTGGCACGAGGAACCTTGCGTACAGTTGGAGCAACGACCCAAGATGAGTA
CCAAAAGCATATCGAAAAAGATGCAGCCCTCTCTCGGCGTTTTGCGAAAGTCACCATTGAAGAGCCAAGTGTTGCAGATA
GCATCCAAATTCTCCAAGGCTTGAAAGAGACCTATCAGGACCACCATCATGTGACCATTACTGATGAAGCGATCGAAACA
GCTGTCAAATATGCCCACCGCTATTTGACCAGCCGTCAATTGCCAGATTCAGCCATTGATCTCTTGGATGAAGCGGCAGC
TACCGTACAAAACCGCGATTCCAACGGTCATGTAAAAGAAGAGTTGACCGCCTTGGATCGGGCCTTGATGGATGGCAAGT
GGAAGAAAGCAGCCCAACTCTTAGAAGTAGAGGCCGCTCCCATTGTCTACAAAAAAGAAGTCACTGACCAAGATGTCTTG
GTGACCTTGAGCCAATTATCGGGTATTCCAACTCAAAAACTGACCCAAACCGATGCCAAGAAGTACCTAAACTTAGAAGC
AGAATTGCACAAGCGCGTGATTGGTCAAGACCAAGCCGTTTCGAGTATCAGTCGGGCTATTCGACGCAATCAATCAGGTA
TTCGTAGCAATAAACGTCCGATCGGTTCTTTCATGTTCCTAGGACCTACCGGTGTCGGAAAAACAGAGCTAGCCAAAGCT
TTGGCAGAAGTTCTGTTTGATGATGAATCGGCCCTCATCCGTTTTGATATGAGTGAGTACATGGAAAAATTTGCGGCTAG
CCGCCTCAACGGTGCCCCTCCAGGCTATGTGGGCTACGAAGAAGGAGGCGAATTGACCGAGAAAGTTCGCAACAAACCAT
ATTCAGTTCTCTTATTTGATGAGGTGGAAAAAGCCCACCCAGATATTTTTAATGTCCTTTTGCAAGTCTTGGATGACGGA
GTCTTAACCGATAGCAAAGGCCGGAAGATTGATTTCTCCAATACCATTATCATCATGACCTCAAATCTGGGAGCAACAGC
CCTTCGGGATGATAAGACAGTTGGCTTTGGTGCCAAAGATATTCGCTTTGATCAGGCCAATATGGAAAAACGCATGTTTG
AAGAGTTGAAGAAGACCTATCGTCCAGAGTTTATCAACCGGATTGATGAAAAGGTGGTCTTCCATAGTCTCTCAAGCGAG
GACATGCAGCAGGTGGTGAAAGTCATGGTCAAACCGCTCATCGCGACCTTGGCCGAACAAGACATGACTCTCAAATTCCA
GCCTTCAGCGCTCAAGTTGCTAGCAACCAAAGGCTACGATCCAGAAATGGGAGCTCGCCCACTGCGTCGTGTCTTGCAGA
CCGAAGTGGAAGATCAACTAGCAGAGCTATTGCTGAAAGGGCAAGCCCAAGAAGGGCAAACCATCAAGGTTGGAACGACA
GCCGGAACGATCAAGTTCGAGATTGTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus pneumoniae TIGR4 |
76.695 |
100 |
0.769 |
| clpC | Streptococcus pneumoniae Rx1 |
76.695 |
100 |
0.769 |
| clpC | Streptococcus pneumoniae D39 |
76.695 |
100 |
0.769 |
| clpC | Streptococcus mutans UA159 |
65.973 |
100 |
0.666 |
| clpC | Streptococcus thermophilus LMG 18311 |
64.496 |
100 |
0.649 |
| clpC | Streptococcus thermophilus LMD-9 |
64.496 |
100 |
0.649 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.601 |
100 |
0.52 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
45.238 |
98.64 |
0.446 |
| clpE | Streptococcus mutans UA159 |
47.847 |
77.503 |
0.371 |
| clpE | Streptococcus pneumoniae Rx1 |
45.917 |
80.222 |
0.368 |
| clpE | Streptococcus pneumoniae D39 |
45.917 |
80.222 |
0.368 |
| clpE | Streptococcus pneumoniae R6 |
45.917 |
80.222 |
0.368 |
| clpE | Streptococcus pneumoniae TIGR4 |
45.917 |
80.222 |
0.368 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
45.938 |
79.11 |
0.363 |