Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   GTW28_RS02175 Genome accession   NZ_CP047485
Coordinates   423427..424377 (+) Length   316 a.a.
NCBI ID   WP_014475804.1    Uniprot ID   A0A0C3FBZ6
Organism   Bacillus subtilis strain BJQ0005     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 418427..429377
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GTW28_RS02150 (GTW28_02150) rapC 419887..421035 (+) 1149 WP_014475800.1 response regulator aspartate phosphatase RapC Regulator
  GTW28_RS02155 (GTW28_02155) phrC 421019..421141 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  GTW28_RS02160 (GTW28_02160) yczM 421241..421330 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  GTW28_RS02165 (GTW28_02165) yczN 421412..421525 (-) 114 WP_014478831.1 YjcZ family sporulation protein -
  GTW28_RS02170 (GTW28_02170) thrD 421678..423042 (-) 1365 WP_015715246.1 aspartate kinase -
  GTW28_RS02175 (GTW28_02175) ceuB 423427..424377 (+) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  GTW28_RS02180 (GTW28_02180) yclO 424370..425317 (+) 948 WP_014475805.1 petrobactin ABC transporter permease YclO -
  GTW28_RS02185 (GTW28_02185) yclP 425311..426069 (+) 759 WP_046380785.1 petrobactin ABC transporter ATP-binding protein YclP -
  GTW28_RS02190 (GTW28_02190) yclQ 426091..427044 (+) 954 WP_038428358.1 petrobactin ABC transporter substrate-binding protein YclQ -
  GTW28_RS02195 (GTW28_02195) cdaE 427091..428509 (-) 1419 WP_014478836.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34871.27 Da        Isoelectric Point: 9.9364

>NTDB_id=413648 GTW28_RS02175 WP_014475804.1 423427..424377(+) (ceuB) [Bacillus subtilis strain BJQ0005]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=413648 GTW28_RS02175 WP_014475804.1 423427..424377(+) (ceuB) [Bacillus subtilis strain BJQ0005]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAACAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGATACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTGATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TGAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCCCTTGTTATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCGGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C3FBZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525

Multiple sequence alignment