Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | GT360_RS13295 | Genome accession | NZ_CP047475 |
| Coordinates | 2857901..2858416 (-) | Length | 171 a.a. |
| NCBI ID | WP_164649312.1 | Uniprot ID | A0A7Z2T537 |
| Organism | Vibrio astriarenae strain HN897 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2852901..2863416
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GT360_RS13280 (GT360_13290) | aroB | 2854324..2855424 (-) | 1101 | WP_164649309.1 | 3-dehydroquinate synthase | - |
| GT360_RS13285 (GT360_13295) | aroK | 2855453..2855971 (-) | 519 | WP_164649310.1 | shikimate kinase AroK | - |
| GT360_RS13290 (GT360_13300) | pilQ | 2856173..2857804 (-) | 1632 | WP_239502635.1 | type IV pilus secretin PilQ | Machinery gene |
| GT360_RS13295 (GT360_13305) | pilP | 2857901..2858416 (-) | 516 | WP_164649312.1 | pilus assembly protein PilP | Machinery gene |
| GT360_RS13300 (GT360_13310) | pilO | 2858406..2858996 (-) | 591 | WP_164649313.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| GT360_RS13305 (GT360_13315) | pilN | 2858989..2859594 (-) | 606 | WP_164649314.1 | PilN domain-containing protein | Machinery gene |
| GT360_RS13310 (GT360_13320) | pilM | 2859584..2860558 (-) | 975 | WP_164649315.1 | type IV pilus assembly protein PilM | - |
| GT360_RS13315 (GT360_13325) | - | 2860697..2863195 (+) | 2499 | WP_164649316.1 | penicillin-binding protein 1A | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 18934.90 Da Isoelectric Point: 10.3195
>NTDB_id=413626 GT360_RS13295 WP_164649312.1 2857901..2858416(-) (pilP) [Vibrio astriarenae strain HN897]
MKSNWPTMILSTLLLLGCKANQESLHNYVQQIEQSASSQIQSLAPAMSFQASRYSQQEPRQPFVLPQAALVVDQPLARRD
CWQPTPRHKSGKLERYPLQKLKLRGMMGSEGDLSALVQTPQGDVAKVRAGQYIGLNNGKVTSVSSNRLVIKETLPDGLGC
WSTRMVTLALK
MKSNWPTMILSTLLLLGCKANQESLHNYVQQIEQSASSQIQSLAPAMSFQASRYSQQEPRQPFVLPQAALVVDQPLARRD
CWQPTPRHKSGKLERYPLQKLKLRGMMGSEGDLSALVQTPQGDVAKVRAGQYIGLNNGKVTSVSSNRLVIKETLPDGLGC
WSTRMVTLALK
Nucleotide
Download Length: 516 bp
>NTDB_id=413626 GT360_RS13295 WP_164649312.1 2857901..2858416(-) (pilP) [Vibrio astriarenae strain HN897]
ATGAAGAGTAATTGGCCTACCATGATCCTTTCCACTTTATTGCTGCTCGGCTGTAAGGCAAATCAAGAATCTTTGCATAA
TTACGTGCAGCAAATTGAGCAAAGCGCCTCTAGTCAAATTCAGAGCTTAGCCCCCGCGATGAGCTTCCAGGCTTCCCGTT
ACTCACAGCAAGAACCCCGACAACCTTTTGTGCTGCCTCAGGCGGCACTTGTTGTTGATCAGCCCTTGGCGCGTCGTGAT
TGCTGGCAGCCGACCCCGCGACATAAAAGCGGCAAGCTAGAGCGTTATCCACTGCAAAAACTTAAGCTACGCGGAATGAT
GGGGAGCGAGGGTGATTTGTCAGCTTTGGTACAGACGCCACAAGGAGATGTGGCAAAGGTTCGTGCTGGACAATATATCG
GGTTAAACAACGGCAAGGTGACATCAGTCAGTAGCAATCGACTAGTGATTAAAGAGACTCTGCCCGATGGCTTGGGGTGT
TGGAGCACCCGTATGGTCACACTCGCATTGAAATAG
ATGAAGAGTAATTGGCCTACCATGATCCTTTCCACTTTATTGCTGCTCGGCTGTAAGGCAAATCAAGAATCTTTGCATAA
TTACGTGCAGCAAATTGAGCAAAGCGCCTCTAGTCAAATTCAGAGCTTAGCCCCCGCGATGAGCTTCCAGGCTTCCCGTT
ACTCACAGCAAGAACCCCGACAACCTTTTGTGCTGCCTCAGGCGGCACTTGTTGTTGATCAGCCCTTGGCGCGTCGTGAT
TGCTGGCAGCCGACCCCGCGACATAAAAGCGGCAAGCTAGAGCGTTATCCACTGCAAAAACTTAAGCTACGCGGAATGAT
GGGGAGCGAGGGTGATTTGTCAGCTTTGGTACAGACGCCACAAGGAGATGTGGCAAAGGTTCGTGCTGGACAATATATCG
GGTTAAACAACGGCAAGGTGACATCAGTCAGTAGCAATCGACTAGTGATTAAAGAGACTCTGCCCGATGGCTTGGGGTGT
TGGAGCACCCGTATGGTCACACTCGCATTGAAATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Vibrio cholerae strain A1552 |
59.509 |
95.322 |
0.567 |
| pilP | Vibrio campbellii strain DS40M4 |
47.368 |
100 |
0.474 |