Detailed information NTG0413615

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: GT360_RS11875
• Genome accession: NZ_CP047475
• Coordinates: 2549142..2552525 (+)
• Length: 1127 a.a.
• NCBI ID: WP_164649080.1
• Uniprot ID: -
• Organism: Vibrio astriarenae strain HN897
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2544142..2557525

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GT360_RS11855 (GT360_11865)	erpA	2544411..2544752 (-)	342	WP_164649076.1	iron-sulfur cluster insertion protein ErpA	-
GT360_RS11860 (GT360_11870)	hemL	2545046..2546338 (+)	1293	WP_164649077.1	glutamate-1-semialdehyde 2,1-aminomutase	-
GT360_RS11865 (GT360_11875)	-	2546619..2547704 (+)	1086	WP_164649078.1	AI-2E family transporter	-
GT360_RS11870 (GT360_11880)	rsmC	2547818..2548840 (+)	1023	WP_164649079.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
GT360_RS11875 (GT360_11885)	chiS	2549142..2552525 (+)	3384	WP_164649080.1	response regulator	Regulator
GT360_RS11880 (GT360_11890)	-	2553165..2554847 (+)	1683	WP_164649081.1	ABC transporter substrate-binding protein	-
GT360_RS11885 (GT360_11895)	-	2555007..2555993 (+)	987	WP_164649082.1	ABC transporter permease	-
GT360_RS11890 (GT360_11900)	-	2555996..2557021 (+)	1026	WP_164649083.1	ABC transporter permease	-

Sequence

Protein

• Length: 1127 a.a.
• Molecular weight: 127104.26 Da
• Isoelectric Point: 4.9331

>NTDB_id=413615 GT360_RS11875 WP_164649080.1 2549142..2552525(+) (chiS) [Vibrio astriarenae strain HN897]
MFGLYKKQKFKRLQSTLMIAFLTLSIIPLTGIALFFLQSHTSDLREQSTSHLVSIRDTKKQQVLNYFEAKESEVMGFVRS
ELAYASGGRFYGLVNAFQNLGLTIEEAQSYAQQRYIPSSGDQIKTSILPDSPIFNGSERYRLLHKRYHWAYLELQKRSDF
DDILLVDREGNVTYSIHKNSDYGTNLLTGRYKDENLGQTFAHLRELVTEQRKTNEDFTPVVVSDFSEQDGKLYAWFGAPI
VQQGYLHSYALFRLPNNAITKLMANQSNEKGVKTLIVGEDYLSRTMGYSQDDIQTSLQVISYALEGLTSVGSYQNALNQD
MLAAYTPVNIDETHWAIVVELAESEAFAGVQQLEKVFIIVMLIAILLVVIASHYLSNFITSPLLKLTWAAEKASAGDLDE
AMQNTERKDEIGRLAVSFERMRRSIREKILLIKSQNEELEENLSIIKKQNEDLQLANKLKDEFLATTSHELRTPLHGMVG
IAEALISGANGPISADHRYQLDIIVSSGQRLSNLVDDLLDYHKMRYGTLDIETSAVNLASATRLVLELSNHLLGNKSIRI
INQVDENLWIDADPQRLEQVLYNLVGNAIKYTSEGKIVISASEVDDNIRVQVVDTGQGIPSEQLEHIFEPLTQAGKDSTH
YRQGAGLGLSISRQLVELMRGALFVSSQPMVGTTMSFTLPKADTAQIEQSIQQPAQPHFDAPTIIELEQQTPTLSVNDDS
PVILIADDEPVNVRVLDSFLRLEGYQVITATDGKQALTMVEQHQPDLLLLDIMMPELNGYEVCTELRKSYDHAQLPIIML
TALNQTEDKLKGFDVGANDFLSKPFNKPELAARIVAHLQASKAEERRQQNDRLQQELKLRLVAEANLLETQGRLLEQLEC
APEAILCIKDDLKVKFANEAASRLFKRSHEQLLRSNAEDFIAPKYLNIDQERFCGDIDIFVEDTRQSISSDVLTLPEGSG
LRSMYIFNVGGGVNANRIYNLESAVEALTSYAFEGDKEKLQQLQGLGGEFTELAARAMKSNQSKQDIMREVLVDAMTNGL
DYWESATGQTKFTFAEESGLWRVYLDRSTLQTRTLDKYLRIETLPKTPRWRTVLNSLDYILEYCASETPQRQHIIALRDK
LQHLIAS

Nucleotide

• Length: 3384 bp

>NTDB_id=413615 GT360_RS11875 WP_164649080.1 2549142..2552525(+) (chiS) [Vibrio astriarenae strain HN897]
ATGTTTGGGTTGTATAAGAAACAAAAATTTAAGCGATTACAAAGCACCTTAATGATCGCATTCCTTACTTTGAGTATCAT
TCCACTCACAGGGATCGCACTTTTTTTCCTGCAGTCCCACACCAGTGATCTGCGCGAACAAAGCACCTCTCATCTCGTCT
CAATTCGAGACACAAAAAAACAGCAAGTGCTCAACTACTTTGAGGCTAAAGAGTCTGAAGTGATGGGCTTTGTGCGATCA
GAGCTTGCTTATGCCAGTGGCGGTCGATTCTATGGTTTAGTGAATGCGTTTCAAAACCTCGGACTCACCATTGAAGAGGC
GCAAAGCTATGCTCAGCAGCGCTATATTCCTAGCTCTGGCGATCAGATAAAAACGTCAATATTGCCAGATTCGCCCATCT
TCAATGGCAGCGAGCGATATCGCTTGCTACACAAGCGCTATCATTGGGCCTACCTAGAACTGCAAAAGCGCTCAGATTTC
GACGACATTTTGCTCGTCGATAGAGAGGGTAATGTCACCTATTCAATCCATAAAAACAGCGACTATGGTACGAACCTTTT
AACTGGCCGCTACAAAGACGAGAACCTAGGACAAACCTTCGCCCACCTGCGTGAATTGGTCACAGAACAACGCAAAACCA
ATGAGGACTTTACCCCCGTCGTGGTCTCCGATTTTTCTGAGCAAGACGGTAAGTTGTATGCTTGGTTTGGCGCTCCAATC
GTTCAACAAGGCTATCTGCACAGCTATGCCCTATTCCGCCTTCCCAACAACGCGATTACCAAATTGATGGCCAATCAAAG
TAATGAGAAAGGGGTTAAGACACTGATTGTCGGTGAGGATTACCTCAGCCGCACTATGGGGTACTCACAAGACGACATTC
AAACCAGCTTGCAGGTCATCTCCTATGCATTAGAGGGCCTCACTAGCGTAGGCAGTTACCAAAACGCCCTCAACCAGGAT
ATGTTAGCGGCCTATACGCCAGTGAATATCGACGAAACTCATTGGGCTATCGTGGTTGAACTAGCAGAAAGTGAGGCCTT
TGCTGGGGTTCAACAACTCGAAAAAGTGTTCATTATCGTCATGTTAATCGCCATCTTACTGGTGGTCATTGCCTCCCACT
ACCTATCAAACTTCATCACCTCCCCACTCCTAAAGTTGACTTGGGCTGCTGAAAAAGCCTCAGCAGGTGATTTAGATGAG
GCGATGCAAAATACCGAACGTAAGGATGAAATCGGCCGACTTGCCGTCAGTTTCGAGCGTATGCGACGTTCGATACGCGA
GAAGATACTGCTGATCAAAAGCCAAAACGAGGAGTTGGAAGAGAACCTCTCGATCATCAAAAAACAGAATGAAGACCTGC
AACTGGCCAACAAACTCAAAGATGAATTTCTCGCGACCACATCGCATGAGCTGCGCACACCACTGCACGGCATGGTGGGA
ATTGCAGAAGCACTGATCTCGGGAGCCAACGGCCCTATCTCTGCTGACCATCGCTATCAGTTAGATATTATCGTCAGCAG
TGGGCAACGCCTATCAAACCTCGTTGATGACCTACTCGATTATCACAAGATGCGCTATGGCACCTTGGATATTGAAACCT
CTGCCGTTAATCTTGCCAGCGCAACACGTTTGGTTCTTGAGCTGTCTAACCATCTACTCGGAAATAAGTCTATCCGCATT
ATCAATCAAGTCGATGAGAATCTATGGATTGATGCAGACCCGCAGCGCTTGGAGCAAGTGCTGTACAATCTGGTAGGCAA
TGCCATCAAATACACCAGCGAAGGCAAGATCGTCATTTCCGCCAGCGAAGTCGATGACAATATTCGAGTTCAAGTAGTGG
ATACAGGTCAAGGCATTCCAAGCGAGCAACTTGAGCATATTTTTGAACCACTGACTCAAGCTGGCAAAGACTCCACCCAC
TATCGCCAGGGAGCGGGACTTGGACTCTCAATTAGTCGCCAACTGGTAGAACTTATGCGTGGTGCGCTGTTTGTGAGTAG
CCAACCTATGGTTGGCACAACCATGAGTTTTACACTACCAAAGGCCGATACTGCGCAAATTGAACAGTCGATACAACAGC
CTGCTCAACCCCATTTCGATGCACCGACCATTATCGAACTTGAACAACAAACGCCTACTCTCTCTGTCAATGATGATAGC
CCGGTCATCCTTATTGCTGATGATGAACCGGTCAACGTGCGAGTGCTCGATAGCTTCTTACGCCTAGAGGGCTATCAGGT
CATCACTGCAACAGACGGTAAGCAAGCACTTACCATGGTTGAGCAGCATCAACCTGATCTGTTGCTTCTCGATATTATGA
TGCCTGAACTGAATGGTTATGAGGTATGTACTGAGCTACGTAAGAGCTATGACCATGCCCAACTGCCTATCATTATGCTA
ACAGCGTTGAATCAAACCGAAGACAAACTGAAAGGCTTTGACGTTGGTGCGAACGATTTCTTGTCAAAACCCTTCAACAA
ACCAGAGTTGGCAGCTCGGATCGTGGCTCATCTTCAAGCAAGCAAAGCGGAAGAGCGCAGGCAACAAAATGATCGGTTGC
AACAGGAGTTAAAGCTTCGATTGGTCGCAGAAGCGAATCTATTAGAGACACAGGGGCGACTGCTTGAGCAGCTTGAATGT
GCACCTGAAGCCATACTGTGCATTAAAGATGACCTGAAAGTTAAGTTTGCCAATGAAGCGGCCTCACGCTTGTTCAAGCG
CAGTCATGAGCAACTTCTCCGCTCTAACGCCGAAGACTTCATTGCACCGAAATATCTCAACATTGACCAAGAGCGCTTCT
GTGGCGATATCGACATTTTTGTAGAGGATACTCGCCAGTCGATATCCAGTGATGTCCTGACACTACCAGAGGGCTCTGGG
CTGCGAAGTATGTATATTTTCAATGTTGGAGGGGGCGTGAATGCCAACCGTATCTACAATCTAGAGTCCGCGGTTGAAGC
CTTAACCAGCTATGCCTTTGAGGGAGATAAAGAGAAGCTTCAGCAACTGCAGGGCTTAGGGGGCGAGTTCACCGAGCTTG
CAGCAAGGGCGATGAAAAGCAACCAGTCTAAACAAGATATTATGCGTGAGGTCCTGGTTGACGCGATGACTAATGGCCTT
GATTACTGGGAAAGTGCTACGGGCCAGACCAAGTTCACCTTTGCAGAGGAAAGTGGCCTGTGGCGTGTTTATCTTGACCG
AAGCACACTGCAAACACGTACTTTGGATAAATACTTACGTATCGAAACGTTACCCAAAACACCGCGCTGGCGAACCGTTC
TCAACTCCCTCGATTACATCCTTGAATACTGCGCGAGTGAAACACCTCAGAGACAACACATCATCGCGCTAAGAGACAAG
TTGCAACATCTCATTGCGAGTTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (723-834)

• HAMP domain (HAMP) (375-427)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (573-681)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	71.681	100	0.719