Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   GSN03_RS06180 Genome accession   NZ_CP047366
Coordinates   1218473..1219156 (+) Length   227 a.a.
NCBI ID   WP_212089621.1    Uniprot ID   -
Organism   Bacillus nitratireducens strain BM02     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1213473..1224156
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GSN03_RS06160 (GSN03_06095) - 1214376..1216022 (+) 1647 WP_000727241.1 peptide ABC transporter substrate-binding protein -
  GSN03_RS06165 (GSN03_06100) - 1216054..1216257 (-) 204 WP_000559981.1 hypothetical protein -
  GSN03_RS28740 - 1216184..1216384 (+) 201 WP_420914329.1 dithiol-disulfide isomerase -
  GSN03_RS06170 (GSN03_06105) spx 1216835..1217230 (+) 396 WP_000258267.1 transcriptional regulator Spx -
  GSN03_RS06175 (GSN03_06110) - 1217281..1217955 (-) 675 WP_000362599.1 TerC family protein -
  GSN03_RS06180 (GSN03_06115) mecA 1218473..1219156 (+) 684 WP_212089621.1 adaptor protein MecA Regulator
  GSN03_RS06185 (GSN03_06120) - 1219229..1220773 (+) 1545 WP_000799215.1 cardiolipin synthase -
  GSN03_RS06190 (GSN03_06125) - 1220864..1222099 (+) 1236 WP_212091504.1 competence protein CoiA -
  GSN03_RS06195 (GSN03_06130) pepF 1222150..1223976 (+) 1827 WP_212089622.1 oligoendopeptidase F Regulator

Sequence

Protein


Download         Length: 227 a.a.        Molecular weight: 27060.12 Da        Isoelectric Point: 4.0018

>NTDB_id=413029 GSN03_RS06180 WP_212089621.1 1218473..1219156(+) (mecA) [Bacillus nitratireducens strain BM02]
MEIERINDHTMKFFITYVDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELEEEEIEPTGTNFNEDGTFGFLIKFNDFEDVILLSHRLIFEDIKDELY
SFEDRYYVYVEFDEVLHDEEEIDRILSIVLEYGEESTLTIHRVSEYGKQVVKEHALETIRNHFPSKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=413029 GSN03_RS06180 WP_212089621.1 1218473..1219156(+) (mecA) [Bacillus nitratireducens strain BM02]
TTGGAAATTGAAAGAATTAACGATCATACGATGAAATTTTTTATTACGTACGTTGATATAGAGGACAGAGGGTTTAACCG
TGAAGAGATTTGGTATGACCGCGAACGGAGTGAAGAACTTTTTTGGGAAATGATGGATGAAGCTCGCGACCATGATGACT
TCTTTATTGATGGACCGTTATGGATTCAAGTGCAAGCAGTCGACAAAGGGATTGAAGTACTTGTAACGAAAGCAGAACTT
TCAAAGGATGGACAAAAATTAGAACTACCAATAGGTGTAGACAAAATTATAGATATTCCTTTAGATGAAGGAATCGAATC
ATTATTCCAGCAAGAATTAGAGGAAGAGGAAATAGAACCGACAGGTACAAACTTTAATGAAGATGGTACGTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTAATCTTATTAAGTCATCGTCTAATTTTTGAAGATATAAAAGATGAACTGTAT
TCATTTGAGGACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAGGAAGAGATTGATCGTATTTTAAG
TATTGTTTTAGAATATGGGGAAGAATCTACTTTAACGATTCATCGTGTAAGTGAGTATGGAAAACAAGTTGTGAAAGAGC
ATGCGCTTGAGACAATTCGTAACCATTTTCCTTCTAAAACGTAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-219)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

55.702

100

0.559

Multiple sequence alignment