Detailed information NTG0413029

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: H4P48_RS00860
• Genome accession: NZ_CP060073
• Coordinates: 186918..187901 (+)
• Length: 327 a.a.
• NCBI ID: WP_047643674.1
• Uniprot ID: -
• Organism: Escherichia coli strain G4/9
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 181918..192901

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H4P48_RS00845 (H4P48_00845)	dppA	183061..184668 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
H4P48_RS22515	-	184702..184812 (-)	111	Protein_174	hypothetical protein	-
H4P48_RS00850 (H4P48_00850)	dppB	184976..185995 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
H4P48_RS00855 (H4P48_00855)	dppC	186005..186907 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
H4P48_RS00860 (H4P48_00860)	amiE	186918..187901 (+)	984	WP_047643674.1	dipeptide ABC transporter ATP-binding protein	Regulator
H4P48_RS00865 (H4P48_00865)	dppF	187898..188902 (+)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
H4P48_RS00870 (H4P48_00870)	yhjV	188932..190203 (-)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
H4P48_RS00875 (H4P48_00875)	ldrD	190679..190786 (+)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
H4P48_RS00880 (H4P48_00880)	bcsG	190873..192552 (-)	1680	WP_000191622.1	cellulose biosynthesis protein BcsG	-
H4P48_RS00885 (H4P48_00885)	bcsF	192549..192740 (-)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35826.33 Da
• Isoelectric Point: 6.5814

>NTDB_id=413029 H4P48_RS00860 WP_047643674.1 186918..187901(+) (amiE) [Escherichia coli strain G4/9]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNILADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=413029 H4P48_RS00860 WP_047643674.1 186918..187901(+) (amiE) [Escherichia coli strain G4/9]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATACTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	45.548	89.297	0.407
amiE	Streptococcus thermophilus LMD-9	45.548	89.297	0.407
oppD	Streptococcus mutans UA159	41.379	97.554	0.404