Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   GSN03_RS06095 Genome accession   NZ_CP047366
Coordinates   1199800..1199976 (+) Length   58 a.a.
NCBI ID   WP_001003333.1    Uniprot ID   A0A2A9RR87
Organism   Bacillus nitratireducens strain BM02     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1194800..1204976
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GSN03_RS06075 (GSN03_06010) clpC 1195127..1197727 (+) 2601 WP_044741163.1 ATP-dependent chaperone ClpB Regulator
  GSN03_RS06080 (GSN03_06015) - 1197761..1197943 (-) 183 WP_001211112.1 YjzD family protein -
  GSN03_RS06085 (GSN03_06020) - 1198100..1198834 (+) 735 WP_000028694.1 hydrolase -
  GSN03_RS06090 (GSN03_06025) - 1198864..1199736 (+) 873 WP_212089610.1 NAD-dependent epimerase/dehydratase family protein -
  GSN03_RS06095 (GSN03_06030) comZ 1199800..1199976 (+) 177 WP_001003333.1 ComZ family protein Regulator
  GSN03_RS06100 (GSN03_06035) fabH 1200379..1201311 (+) 933 WP_044741165.1 beta-ketoacyl-ACP synthase III -
  GSN03_RS06105 (GSN03_06040) fabF 1201343..1202581 (+) 1239 WP_212089612.1 beta-ketoacyl-ACP synthase II -
  GSN03_RS06110 (GSN03_06045) - 1202687..1203478 (+) 792 WP_212089614.1 DUF2268 domain-containing protein -
  GSN03_RS06115 (GSN03_06050) - 1203621..1204367 (+) 747 WP_000966130.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6519.68 Da        Isoelectric Point: 4.4797

>NTDB_id=413026 GSN03_RS06095 WP_001003333.1 1199800..1199976(+) (comZ) [Bacillus nitratireducens strain BM02]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMGEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=413026 GSN03_RS06095 WP_001003333.1 1199800..1199976(+) (comZ) [Bacillus nitratireducens strain BM02]
ATGAACGAAAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCAATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAAGCACAGCCGGTGTTAGAGCTATTGATGAAAGTAATGGGCGAAGCATATGAGCTTGGGA
AAGCTGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2A9RR87

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment