Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | GSN03_RS00465 | Genome accession | NZ_CP047366 |
| Coordinates | 89218..91653 (+) | Length | 811 a.a. |
| NCBI ID | WP_000971190.1 | Uniprot ID | A0A2C1NQT5 |
| Organism | Bacillus nitratireducens strain BM02 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 84218..96653
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GSN03_RS00450 (GSN03_00450) | ctsR | 86948..87409 (+) | 462 | WP_001244553.1 | transcriptional regulator CtsR | - |
| GSN03_RS00455 (GSN03_00455) | - | 87578..88126 (+) | 549 | WP_000128379.1 | UvrB/UvrC motif-containing protein | - |
| GSN03_RS00460 (GSN03_00460) | - | 88131..89195 (+) | 1065 | WP_000050844.1 | protein arginine kinase | - |
| GSN03_RS00465 (GSN03_00465) | clpC | 89218..91653 (+) | 2436 | WP_000971190.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| GSN03_RS00470 (GSN03_00470) | radA | 91749..93125 (+) | 1377 | WP_001085206.1 | DNA repair protein RadA | Machinery gene |
| GSN03_RS00475 (GSN03_00475) | disA | 93129..94202 (+) | 1074 | WP_212088781.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| GSN03_RS00480 (GSN03_00480) | - | 94364..95473 (+) | 1110 | WP_000919675.1 | PIN/TRAM domain-containing protein | - |
| GSN03_RS00485 (GSN03_00485) | ispD | 95490..96170 (+) | 681 | WP_000288303.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
Sequence
Protein
Download Length: 811 a.a. Molecular weight: 90570.49 Da Isoelectric Point: 6.4872
>NTDB_id=413014 GSN03_RS00465 WP_000971190.1 89218..91653(+) (clpC) [Bacillus nitratireducens strain BM02]
MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEASQTVHY
TPRAKKVIELSMDEARKLGHSYVGTEHVLLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEASSGHQGGSSTNAN
TPTLDSLARDLTVVARENRLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIHVDEPSLEESIQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYITDRFLPDKAIDLIDEAA
SKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEDTKRQWKEQQGKENSEVTVEDIANV
VSTWTRIPVSKLAQTETDKLLNLESILHDRLIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTIVIMTSNVGADALKRNKHLGFNVQDESRDYSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHI
QEIVTLMVNQLVKRLKEQEIELHLTEGAIAAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVIFDVEGE
SFVIHSAEKVK
MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEASQTVHY
TPRAKKVIELSMDEARKLGHSYVGTEHVLLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEASSGHQGGSSTNAN
TPTLDSLARDLTVVARENRLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIHVDEPSLEESIQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYITDRFLPDKAIDLIDEAA
SKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEDTKRQWKEQQGKENSEVTVEDIANV
VSTWTRIPVSKLAQTETDKLLNLESILHDRLIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTIVIMTSNVGADALKRNKHLGFNVQDESRDYSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHI
QEIVTLMVNQLVKRLKEQEIELHLTEGAIAAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVIFDVEGE
SFVIHSAEKVK
Nucleotide
Download Length: 2436 bp
>NTDB_id=413014 GSN03_RS00465 WP_000971190.1 89218..91653(+) (clpC) [Bacillus nitratireducens strain BM02]
ATGATGTTTGGAAGATTTACAGAACGAGCACAGAAAGTATTAGCTTTATCTCAAGAGGAAGCAATTCGCATTGGGCATAA
TAATATTGGTACAGAACATATTTTACTTGGGCTTGTACGCGAAGGCGAAGGGATTGCAGCAAAAGCGTTAATTGCTCTTG
GATTAAGTCCAGAGAAAGTTCAAAAAGAGGTAGAAGCATTAATTGGGCGTGGAACAGAAGCTTCACAAACAGTACATTAC
ACACCTCGTGCTAAAAAGGTTATTGAGTTGTCCATGGATGAAGCGCGTAAGTTAGGCCATTCCTACGTTGGAACAGAACA
TGTTTTACTTGGTTTAATCCGTGAAGGTGAAGGGGTAGCGGCACGTGTTTTAAATAATTTAGGTGTAAGTCTAAACAAGG
CAAGACAACAAGTATTGCAACTTCTTGGAAGTAACGAAGCTAGTTCAGGTCACCAAGGCGGTTCGTCAACAAATGCAAAT
ACACCGACGCTTGATAGTTTAGCGCGTGATTTAACAGTTGTGGCACGTGAAAATCGTTTAGATCCTGTTATTGGACGTAG
TAAAGAAATTCAACGTGTAATTGAAGTGTTAAGCCGTAGAACAAAAAACAATCCAGTATTAATTGGAGAACCTGGTGTAG
GTAAGACAGCAATTGCAGAAGGATTAGCACAGCAAATTGTAAATAATGAAGTTCCTGAAACTTTAAGAGATAAGCGTGTT
ATGACATTAGATATGGGGACAGTTGTAGCTGGAACGAAATATCGTGGTGAATTTGAAGACCGTTTAAAGAAAGTGATGGA
TGAAATTCGTCAAGCAGGCAATATTATTCTATTTATTGATGAGCTTCATACATTAATTGGCGCAGGTGGAGCAGAAGGTG
CAATTGATGCATCAAATATTTTAAAACCATCTCTAGCTCGTGGTGAATTGCAATGTATTGGGGCGACAACCTTAGATGAA
TATCGTAAATATATTGAAAAAGACGCAGCTTTAGAGAGACGTTTCCAGCCGATCCACGTTGATGAGCCGAGTTTAGAGGA
ATCAATTCAAATTTTGAAAGGTTTACGTGATCGTTACGAGGCGCATCACCGTGTATCTATTACAGATGATGCAATCGATG
CGGCTGTAAAACTTTCAGATCGTTATATTACAGATCGTTTCTTACCTGATAAAGCAATTGATTTAATTGATGAGGCTGCA
TCAAAAGTACGTTTACGTTCTTATACAACACCACCGAACTTAAAAGAGCTTGAAGTGAAGCTTGAGGAAATTAGAAAAGA
AAAAGATGCAGCTGTACAAAGTCAAGAATTTGAAAAAGCTGCTTCCTTACGTGATATGGAACAACGTTTACGTGAAAAGT
TAGAAGATACAAAACGCCAGTGGAAAGAGCAACAAGGAAAAGAAAATTCAGAAGTAACAGTAGAAGACATTGCAAATGTC
GTTTCCACATGGACACGTATCCCAGTTTCTAAACTTGCACAAACAGAGACGGATAAATTATTAAACTTAGAATCGATTTT
ACATGATCGTTTAATTGGTCAAGATGAAGCAGTCGTAGCTGTGGCAAAAGCTGTTCGTCGTGCAAGAGCAGGATTAAAAG
ATCCGAAGCGCCCAATTGGTTCATTTATTTTCTTAGGACCAACAGGTGTAGGTAAAACGGAACTTGCAAGAGCGTTAGCG
GAATCTATGTTCGGTGATGAGGATGCGATGATTCGTATCGATATGTCTGAGTACATGGAGAAGCATTCTACTTCTCGTTT
AGTTGGATCTCCTCCAGGATATGTTGGATATGAAGAAGGTGGACAATTAACAGAGAAAGTTCGTCGTAAGCCATATTCGG
TTGTCCTATTAGATGAGGTAGAGAAAGCTCATCCTGATGTGTTTAATATTTTACTACAAGTATTAGAAGATGGTCGTTTA
ACGGATTCTAAAGGGCGTACAGTTGATTTCCGTAATACAATTGTTATTATGACGTCTAATGTCGGTGCAGATGCGTTAAA
ACGTAATAAACATCTTGGCTTTAACGTACAAGATGAGAGCCGCGATTATTCAGATATGAAAGGTAAAGTAATGGATGAAC
TGAAAAAGGCATTCCGTCCAGAATTCTTAAACCGTATTGATGAAATTATCGTGTTCCATATGCTTGAGAAAAAACATATT
CAAGAGATTGTAACACTTATGGTTAATCAGTTAGTGAAGCGCCTAAAAGAACAAGAGATTGAATTACACCTAACAGAAGG
AGCGATTGCAGCGATTGCTGATAAAGGATTTGATCGTGAGTACGGTGCTCGTCCACTTCGTAGGGCAATTCAGAAGCATG
TGGAAGATAGACTGTCAGAAGAACTGTTAAAAGGCGCTATTGAGAAAGGACAAAAAGTTATCTTTGATGTAGAAGGAGAA
TCATTTGTCATTCATAGTGCGGAAAAGGTAAAATAA
ATGATGTTTGGAAGATTTACAGAACGAGCACAGAAAGTATTAGCTTTATCTCAAGAGGAAGCAATTCGCATTGGGCATAA
TAATATTGGTACAGAACATATTTTACTTGGGCTTGTACGCGAAGGCGAAGGGATTGCAGCAAAAGCGTTAATTGCTCTTG
GATTAAGTCCAGAGAAAGTTCAAAAAGAGGTAGAAGCATTAATTGGGCGTGGAACAGAAGCTTCACAAACAGTACATTAC
ACACCTCGTGCTAAAAAGGTTATTGAGTTGTCCATGGATGAAGCGCGTAAGTTAGGCCATTCCTACGTTGGAACAGAACA
TGTTTTACTTGGTTTAATCCGTGAAGGTGAAGGGGTAGCGGCACGTGTTTTAAATAATTTAGGTGTAAGTCTAAACAAGG
CAAGACAACAAGTATTGCAACTTCTTGGAAGTAACGAAGCTAGTTCAGGTCACCAAGGCGGTTCGTCAACAAATGCAAAT
ACACCGACGCTTGATAGTTTAGCGCGTGATTTAACAGTTGTGGCACGTGAAAATCGTTTAGATCCTGTTATTGGACGTAG
TAAAGAAATTCAACGTGTAATTGAAGTGTTAAGCCGTAGAACAAAAAACAATCCAGTATTAATTGGAGAACCTGGTGTAG
GTAAGACAGCAATTGCAGAAGGATTAGCACAGCAAATTGTAAATAATGAAGTTCCTGAAACTTTAAGAGATAAGCGTGTT
ATGACATTAGATATGGGGACAGTTGTAGCTGGAACGAAATATCGTGGTGAATTTGAAGACCGTTTAAAGAAAGTGATGGA
TGAAATTCGTCAAGCAGGCAATATTATTCTATTTATTGATGAGCTTCATACATTAATTGGCGCAGGTGGAGCAGAAGGTG
CAATTGATGCATCAAATATTTTAAAACCATCTCTAGCTCGTGGTGAATTGCAATGTATTGGGGCGACAACCTTAGATGAA
TATCGTAAATATATTGAAAAAGACGCAGCTTTAGAGAGACGTTTCCAGCCGATCCACGTTGATGAGCCGAGTTTAGAGGA
ATCAATTCAAATTTTGAAAGGTTTACGTGATCGTTACGAGGCGCATCACCGTGTATCTATTACAGATGATGCAATCGATG
CGGCTGTAAAACTTTCAGATCGTTATATTACAGATCGTTTCTTACCTGATAAAGCAATTGATTTAATTGATGAGGCTGCA
TCAAAAGTACGTTTACGTTCTTATACAACACCACCGAACTTAAAAGAGCTTGAAGTGAAGCTTGAGGAAATTAGAAAAGA
AAAAGATGCAGCTGTACAAAGTCAAGAATTTGAAAAAGCTGCTTCCTTACGTGATATGGAACAACGTTTACGTGAAAAGT
TAGAAGATACAAAACGCCAGTGGAAAGAGCAACAAGGAAAAGAAAATTCAGAAGTAACAGTAGAAGACATTGCAAATGTC
GTTTCCACATGGACACGTATCCCAGTTTCTAAACTTGCACAAACAGAGACGGATAAATTATTAAACTTAGAATCGATTTT
ACATGATCGTTTAATTGGTCAAGATGAAGCAGTCGTAGCTGTGGCAAAAGCTGTTCGTCGTGCAAGAGCAGGATTAAAAG
ATCCGAAGCGCCCAATTGGTTCATTTATTTTCTTAGGACCAACAGGTGTAGGTAAAACGGAACTTGCAAGAGCGTTAGCG
GAATCTATGTTCGGTGATGAGGATGCGATGATTCGTATCGATATGTCTGAGTACATGGAGAAGCATTCTACTTCTCGTTT
AGTTGGATCTCCTCCAGGATATGTTGGATATGAAGAAGGTGGACAATTAACAGAGAAAGTTCGTCGTAAGCCATATTCGG
TTGTCCTATTAGATGAGGTAGAGAAAGCTCATCCTGATGTGTTTAATATTTTACTACAAGTATTAGAAGATGGTCGTTTA
ACGGATTCTAAAGGGCGTACAGTTGATTTCCGTAATACAATTGTTATTATGACGTCTAATGTCGGTGCAGATGCGTTAAA
ACGTAATAAACATCTTGGCTTTAACGTACAAGATGAGAGCCGCGATTATTCAGATATGAAAGGTAAAGTAATGGATGAAC
TGAAAAAGGCATTCCGTCCAGAATTCTTAAACCGTATTGATGAAATTATCGTGTTCCATATGCTTGAGAAAAAACATATT
CAAGAGATTGTAACACTTATGGTTAATCAGTTAGTGAAGCGCCTAAAAGAACAAGAGATTGAATTACACCTAACAGAAGG
AGCGATTGCAGCGATTGCTGATAAAGGATTTGATCGTGAGTACGGTGCTCGTCCACTTCGTAGGGCAATTCAGAAGCATG
TGGAAGATAGACTGTCAGAAGAACTGTTAAAAGGCGCTATTGAGAAAGGACAAAAAGTTATCTTTGATGTAGAAGGAGAA
TCATTTGTCATTCATAGTGCGGAAAAGGTAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
86.049 |
99.877 |
0.859 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.5 |
98.644 |
0.498 |
| clpC | Streptococcus thermophilus LMD-9 |
46.089 |
100 |
0.472 |
| clpC | Streptococcus mutans UA159 |
45 |
100 |
0.466 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.597 |
100 |
0.466 |
| clpC | Streptococcus pneumoniae D39 |
46.675 |
98.274 |
0.459 |
| clpC | Streptococcus pneumoniae Rx1 |
46.675 |
98.274 |
0.459 |
| clpC | Streptococcus pneumoniae TIGR4 |
46.375 |
98.644 |
0.457 |
| clpE | Streptococcus mutans UA159 |
53.538 |
80.148 |
0.429 |
| clpE | Streptococcus pneumoniae R6 |
52.705 |
79.778 |
0.42 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.705 |
79.778 |
0.42 |
| clpE | Streptococcus pneumoniae Rx1 |
52.705 |
79.778 |
0.42 |
| clpE | Streptococcus pneumoniae D39 |
52.705 |
79.778 |
0.42 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
49.125 |
84.587 |
0.416 |