Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | GSF72_RS03650 | Genome accession | NZ_CP047321 |
| Coordinates | 733746..734141 (+) | Length | 131 a.a. |
| NCBI ID | WP_048665209.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain RJ1267 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 728746..739141
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GSF72_RS03620 (GSF72_03620) | - | 730004..730408 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| GSF72_RS03625 (GSF72_03625) | - | 730746..730838 (+) | 93 | WP_001790611.1 | hypothetical protein | - |
| GSF72_RS03630 (GSF72_03630) | - | 730970..731203 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| GSF72_RS03635 (GSF72_03635) | murA | 731314..732579 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| GSF72_RS03640 (GSF72_03640) | fabZ | 732613..733053 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| GSF72_RS03645 (GSF72_03645) | - | 733112..733552 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| GSF72_RS03650 (GSF72_03650) | ssb | 733746..734141 (+) | 396 | WP_048665209.1 | single-stranded DNA-binding protein | Machinery gene |
| GSF72_RS03655 (GSF72_03655) | sceD | 734530..735225 (+) | 696 | WP_000752008.1 | lytic transglycosylase SceD | - |
| GSF72_RS03660 (GSF72_03660) | tenA | 735611..736300 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| GSF72_RS03665 (GSF72_03665) | thiD | 736293..737123 (+) | 831 | WP_000594959.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| GSF72_RS03670 (GSF72_03670) | thiM | 737107..737898 (+) | 792 | WP_001108479.1 | hydroxyethylthiazole kinase | - |
| GSF72_RS03675 (GSF72_03675) | thiE | 737900..738541 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=412619 GSF72_RS03650 WP_048665209.1 733746..734141(+) (ssb) [Staphylococcus aureus strain RJ1267]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEIISDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEIISDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=412619 GSF72_RS03650 WP_048665209.1 733746..734141(+) (ssb) [Staphylococcus aureus strain RJ1267]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTATCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTATCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
99.237 |
100 |
0.992 |
| ssb | Staphylococcus aureus MW2 |
98.473 |
100 |
0.985 |