Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | GKS41_RS14325 | Genome accession | NZ_CP047268 |
| Coordinates | 2915069..2915383 (-) | Length | 104 a.a. |
| NCBI ID | WP_017418140.1 | Uniprot ID | A0AAP3YC32 |
| Organism | Bacillus velezensis strain DH8043 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2910069..2920383
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GKS41_RS14280 | sinI | 2910750..2910923 (+) | 174 | WP_159354372.1 | anti-repressor SinI | Regulator |
| GKS41_RS14285 | sinR | 2910957..2911292 (+) | 336 | WP_003153104.1 | transcriptional regulator SinR | Regulator |
| GKS41_RS14290 | tasA | 2911340..2912125 (-) | 786 | WP_017418136.1 | biofilm matrix protein TasA | - |
| GKS41_RS14295 | sipW | 2912190..2912774 (-) | 585 | WP_012117977.1 | signal peptidase I SipW | - |
| GKS41_RS14300 | tapA | 2912746..2913417 (-) | 672 | WP_014418371.1 | amyloid fiber anchoring/assembly protein TapA | - |
| GKS41_RS14305 | - | 2913676..2914005 (+) | 330 | WP_012117979.1 | DUF3889 domain-containing protein | - |
| GKS41_RS14310 | - | 2914046..2914225 (-) | 180 | WP_003153093.1 | YqzE family protein | - |
| GKS41_RS14315 | comGG | 2914282..2914659 (-) | 378 | WP_017418138.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| GKS41_RS14320 | comGF | 2914660..2915055 (-) | 396 | WP_021494311.1 | competence type IV pilus minor pilin ComGF | - |
| GKS41_RS14325 | comGE | 2915069..2915383 (-) | 315 | WP_017418140.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| GKS41_RS14330 | comGD | 2915367..2915804 (-) | 438 | WP_159354373.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| GKS41_RS14335 | comGC | 2915794..2916102 (-) | 309 | WP_159354374.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| GKS41_RS14340 | comGB | 2916107..2917144 (-) | 1038 | WP_053284924.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| GKS41_RS14345 | comGA | 2917131..2918201 (-) | 1071 | WP_159354375.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| GKS41_RS14350 | - | 2918394..2919344 (-) | 951 | WP_014418379.1 | magnesium transporter CorA family protein | - |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 11785.77 Da Isoelectric Point: 5.8181
>NTDB_id=412019 GKS41_RS14325 WP_017418140.1 2915069..2915383(-) (comGE) [Bacillus velezensis strain DH8043]
MLNGNKGFSTIETLSAMAIWLFLMTSIIPVWTGMLTDGLKIEDRQEAYQLLQKHISTYMMTGKKPPSPGVKWKEDGEYYK
VCAADPGEKEMCLSILKTDWLYAS
MLNGNKGFSTIETLSAMAIWLFLMTSIIPVWTGMLTDGLKIEDRQEAYQLLQKHISTYMMTGKKPPSPGVKWKEDGEYYK
VCAADPGEKEMCLSILKTDWLYAS
Nucleotide
Download Length: 315 bp
>NTDB_id=412019 GKS41_RS14325 WP_017418140.1 2915069..2915383(-) (comGE) [Bacillus velezensis strain DH8043]
ATGCTAAACGGAAATAAGGGGTTCTCTACTATTGAAACGCTATCAGCAATGGCCATTTGGCTGTTCCTTATGACGTCTAT
CATTCCAGTCTGGACGGGCATGCTGACAGATGGCCTGAAAATAGAAGATCGCCAGGAAGCGTACCAGCTTCTTCAGAAAC
ATATCAGCACTTATATGATGACCGGAAAAAAGCCGCCGTCTCCCGGTGTGAAGTGGAAGGAGGATGGTGAGTATTACAAA
GTGTGTGCGGCTGACCCCGGCGAAAAAGAAATGTGCCTCAGCATTCTCAAAACAGACTGGCTTTACGCTTCTTAA
ATGCTAAACGGAAATAAGGGGTTCTCTACTATTGAAACGCTATCAGCAATGGCCATTTGGCTGTTCCTTATGACGTCTAT
CATTCCAGTCTGGACGGGCATGCTGACAGATGGCCTGAAAATAGAAGATCGCCAGGAAGCGTACCAGCTTCTTCAGAAAC
ATATCAGCACTTATATGATGACCGGAAAAAAGCCGCCGTCTCCCGGTGTGAAGTGGAAGGAGGATGGTGAGTATTACAAA
GTGTGTGCGGCTGACCCCGGCGAAAAAGAAATGTGCCTCAGCATTCTCAAAACAGACTGGCTTTACGCTTCTTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Bacillus subtilis subsp. subtilis str. 168 |
43.478 |
100 |
0.481 |