Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   GKS41_RS08065 Genome accession   NZ_CP047268
Coordinates   1581085..1581276 (+) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis strain DH8043     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1576085..1586276
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GKS41_RS08035 argF 1576937..1577908 (+) 972 WP_159354005.1 ornithine carbamoyltransferase -
  GKS41_RS08040 - 1577984..1578163 (+) 180 WP_003155070.1 YjzC family protein -
  GKS41_RS08045 - 1578200..1578385 (-) 186 WP_007409129.1 YjzD family protein -
  GKS41_RS08050 - 1578646..1579379 (+) 734 Protein_1543 hypothetical protein -
  GKS41_RS08055 - 1579462..1580028 (+) 567 WP_017417444.1 hypothetical protein -
  GKS41_RS08060 med 1580119..1581072 (+) 954 WP_072177123.1 BMP family ABC transporter substrate-binding protein Regulator
  GKS41_RS08065 comZ 1581085..1581276 (+) 192 WP_003155061.1 ComZ family protein Regulator
  GKS41_RS08070 - 1581305..1581523 (-) 219 WP_007409123.1 hypothetical protein -
  GKS41_RS08075 - 1581690..1582628 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  GKS41_RS08080 fabF 1582651..1583889 (+) 1239 WP_012117277.1 beta-ketoacyl-ACP synthase II -
  GKS41_RS08085 - 1583973..1584758 (+) 786 WP_159354006.1 DUF2268 domain-containing protein -
  GKS41_RS08090 - 1584932..1585918 (+) 987 WP_033574515.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=411998 GKS41_RS08065 WP_003155061.1 1581085..1581276(+) (comZ) [Bacillus velezensis strain DH8043]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=411998 GKS41_RS08065 WP_003155061.1 1581085..1581276(+) (comZ) [Bacillus velezensis strain DH8043]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794

Multiple sequence alignment