Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   N015_RS02925 Genome accession   NZ_CP047265
Coordinates   640878..641288 (+) Length   136 a.a.
NCBI ID   WP_024685311.1    Uniprot ID   A0AAU8LKW9
Organism   Pseudomonas asturiensis strain CC1524     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 635878..646288
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N015_RS02900 (N015_02900) pyrR 636547..637059 (-) 513 WP_024684939.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  N015_RS02905 (N015_02905) ruvX 637158..637598 (-) 441 WP_024684940.1 Holliday junction resolvase RuvX -
  N015_RS02910 (N015_02910) - 637598..638170 (-) 573 WP_024684941.1 YqgE/AlgH family protein -
  N015_RS02915 (N015_02915) - 638249..639151 (-) 903 WP_024684942.1 energy transducer TonB -
  N015_RS02920 (N015_02920) gshB 639674..640633 (-) 960 WP_024685312.1 glutathione synthase -
  N015_RS02925 (N015_02925) pilG 640878..641288 (+) 411 WP_024685311.1 twitching motility response regulator PilG Regulator
  N015_RS02930 (N015_02930) pilH 641336..641701 (+) 366 WP_004884368.1 twitching motility response regulator PilH -
  N015_RS02935 (N015_02935) - 641716..642255 (+) 540 WP_024685310.1 chemotaxis protein CheW -
  N015_RS02940 (N015_02940) - 642331..644373 (+) 2043 WP_024685309.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 14995.49 Da        Isoelectric Point: 8.5283

>NTDB_id=411914 N015_RS02925 WP_024685311.1 640878..641288(+) (pilG) [Pseudomonas asturiensis strain CC1524]
MEQHPTALKVMVIDDSKTIRRTAETLLKNAGCDVITAVDGFDALAKIADNHPRIIFVDIMMPRLDGYQTCALIKNNRAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLSAIKAHVPSFVAAEQHIP

Nucleotide


Download         Length: 411 bp        

>NTDB_id=411914 N015_RS02925 WP_024685311.1 640878..641288(+) (pilG) [Pseudomonas asturiensis strain CC1524]
ATGGAACAACACCCCACAGCCCTGAAAGTCATGGTCATCGATGACTCGAAGACCATCCGCCGCACCGCCGAAACGCTGCT
GAAAAACGCAGGATGTGACGTCATCACGGCGGTGGACGGTTTCGACGCCCTGGCCAAGATTGCCGATAACCACCCGCGCA
TCATATTCGTCGATATCATGATGCCGCGCCTGGACGGCTATCAGACCTGCGCCCTGATCAAGAACAACCGTGCCTTCAAG
TCCACACCTGTCATCATGCTGTCCTCCAAGGATGGGCTGTTCGACAAGGCCAAAGGACGAATCGTAGGTTCTGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTCAGCGCGATCAAGGCTCATGTGCCGAGCTTCGTTGCAGCAGAACAAC
ATATACCGTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

93.382

0.699
  vicR Streptococcus mutans UA159

41.88

86.029

0.36

Multiple sequence alignment