Detailed information NTG0041168

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: EC042_RS22985
• Genome accession: NC_017626
• Coordinates: 4595691..4596716 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli 042
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4590691..4601716

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EC042_RS22955 (EC042_4302)	zapB	4590775..4591020 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
EC042_RS22960 (EC042_4303)	rraA	4591105..4591590 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
EC042_RS22965 (EC042_4304)	menA	4591683..4592609 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
EC042_RS22970 (EC042_4305)	hslU	4592676..4594007 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
EC042_RS22975 (EC042_4306)	hslV	4594017..4594547 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
EC042_RS22980 (EC042_4307)	ftsN	4594640..4595599 (-)	960	WP_000068828.1	cell division protein FtsN	-
EC042_RS22985 (EC042_4308)	cytR	4595691..4596716 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
EC042_RS22990 (EC042_4309)	priA	4596872..4599070 (-)	2199	WP_014639370.1	primosomal protein N'	Machinery gene
EC042_RS22995 (EC042_4310)	rpmE	4599273..4599485 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
EC042_RS23000 (EC042_4311)	yiiX	4599546..4600154 (-)	609	WP_000702307.1	YiiX family permuted papain-like enzyme	-
EC042_RS23005 (EC042_4312)	metJ	4600214..4600531 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=41168 EC042_RS22985 WP_000644904.1 4595691..4596716(-) (cytR) [Escherichia coli 042]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=41168 EC042_RS22985 WP_000644904.1 4595691..4596716(-) (cytR) [Escherichia coli 042]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCTCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGTACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTGAAAGTACCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628