Detailed information
Bioinformatically predicted
Overview
| Name | CJE1441 | Type | Regulator |
| Locus tag | GR340_RS03145 | Genome accession | NZ_CP047197 |
| Coordinates | 596768..597421 (-) | Length | 217 a.a. |
| NCBI ID | WP_060786368.1 | Uniprot ID | - |
| Organism | Campylobacter coli strain JZ_1_95 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 569159..616149 | 596768..597421 | within | 0 |
Gene organization within MGE regions
Location: 569159..616149
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GR340_RS02965 (GR340_02915) | - | 569159..570532 (+) | 1374 | WP_002780905.1 | replicative DNA helicase | - |
| GR340_RS02970 (GR340_02920) | - | 570666..570806 (-) | 141 | WP_002790042.1 | hypothetical protein | - |
| GR340_RS02975 | - | 570769..570897 (-) | 129 | WP_002780907.1 | hypothetical protein | - |
| GR340_RS02980 | - | 570890..571006 (-) | 117 | WP_002780908.1 | EexN family lipoprotein | - |
| GR340_RS02985 (GR340_02930) | - | 571948..572238 (+) | 291 | WP_002788257.1 | hypothetical protein | - |
| GR340_RS02990 (GR340_02935) | - | 572225..572566 (+) | 342 | WP_002788260.1 | HNH endonuclease signature motif containing protein | - |
| GR340_RS02995 (GR340_02940) | - | 572825..573460 (+) | 636 | WP_277737527.1 | P27 family phage terminase small subunit | - |
| GR340_RS03000 (GR340_02945) | - | 573464..575089 (+) | 1626 | WP_011049938.1 | terminase TerL endonuclease subunit | - |
| GR340_RS03005 (GR340_02950) | - | 575144..575578 (+) | 435 | WP_002913302.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| GR340_RS03010 (GR340_02955) | - | 575737..576909 (+) | 1173 | WP_002788272.1 | phage portal protein | - |
| GR340_RS03015 (GR340_02960) | - | 576906..577448 (+) | 543 | WP_002800770.1 | HK97 gp10 family phage protein | - |
| GR340_RS03020 (GR340_02965) | - | 577449..577799 (+) | 351 | WP_002788276.1 | hypothetical protein | - |
| GR340_RS03025 (GR340_02970) | - | 577787..578050 (-) | 264 | WP_002869971.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| GR340_RS03030 (GR340_02975) | - | 578047..578271 (-) | 225 | WP_002869970.1 | DUF6290 family protein | - |
| GR340_RS03035 (GR340_02980) | - | 578418..579398 (+) | 981 | WP_002788279.1 | hypothetical protein | - |
| GR340_RS03040 (GR340_02985) | - | 579395..579751 (+) | 357 | WP_002788281.1 | hypothetical protein | - |
| GR340_RS03045 (GR340_02990) | - | 579832..580047 (+) | 216 | WP_002788282.1 | hypothetical protein | - |
| GR340_RS03050 (GR340_02995) | - | 580039..580377 (-) | 339 | WP_002788283.1 | hypothetical protein | - |
| GR340_RS03055 (GR340_03000) | - | 580437..586136 (+) | 5700 | WP_277737528.1 | hypothetical protein | - |
| GR340_RS03060 (GR340_03005) | - | 586149..587018 (+) | 870 | WP_002788286.1 | hypothetical protein | - |
| GR340_RS03065 (GR340_03010) | - | 587104..587661 (+) | 558 | WP_002788287.1 | HK97 family phage prohead protease | - |
| GR340_RS03070 (GR340_03015) | - | 587720..588844 (+) | 1125 | WP_341535511.1 | phage major capsid protein | - |
| GR340_RS03075 (GR340_03020) | - | 588855..589106 (+) | 252 | WP_002788291.1 | hypothetical protein | - |
| GR340_RS03080 (GR340_03025) | - | 589103..589540 (+) | 438 | WP_277737530.1 | hypothetical protein | - |
| GR340_RS03085 (GR340_03030) | - | 589553..589870 (+) | 318 | WP_002788295.1 | head-tail adaptor protein | - |
| GR340_RS03090 (GR340_03035) | - | 589867..590499 (+) | 633 | WP_002869967.1 | hypothetical protein | - |
| GR340_RS03095 (GR340_03040) | - | 590492..592057 (+) | 1566 | WP_215445535.1 | hypothetical protein | - |
| GR340_RS03100 (GR340_03045) | - | 592059..592508 (+) | 450 | WP_215445536.1 | hypothetical protein | - |
| GR340_RS03105 (GR340_03050) | - | 592521..593156 (+) | 636 | WP_002789149.1 | DUF4376 domain-containing protein | - |
| GR340_RS03110 (GR340_03055) | - | 593153..593536 (+) | 384 | WP_002869963.1 | hypothetical protein | - |
| GR340_RS03115 (GR340_03060) | - | 593529..593903 (+) | 375 | WP_004306042.1 | DUF1353 domain-containing protein | - |
| GR340_RS03120 (GR340_03065) | - | 593900..595183 (+) | 1284 | WP_277737531.1 | hypothetical protein | - |
| GR340_RS03125 (GR340_03070) | - | 595232..595693 (+) | 462 | WP_060786366.1 | DUF5675 family protein | - |
| GR340_RS03130 (GR340_03075) | - | 595922..596341 (+) | 420 | WP_060786367.1 | hypothetical protein | - |
| GR340_RS03135 (GR340_03080) | - | 596259..596456 (+) | 198 | WP_002870262.1 | hypothetical protein | - |
| GR340_RS03140 (GR340_03085) | - | 596470..596751 (-) | 282 | WP_002870263.1 | PLDc N-terminal domain-containing protein | - |
| GR340_RS03145 (GR340_03090) | CJE1441 | 596768..597421 (-) | 654 | WP_060786368.1 | DNA/RNA non-specific endonuclease | Regulator |
| GR340_RS03150 (GR340_03095) | - | 597418..597768 (-) | 351 | WP_048818574.1 | hypothetical protein | - |
| GR340_RS03155 (GR340_03100) | - | 597776..598696 (-) | 921 | WP_070216836.1 | DUF6731 family protein | - |
| GR340_RS03160 (GR340_03105) | - | 598875..599192 (-) | 318 | WP_060786369.1 | hypothetical protein | - |
| GR340_RS03165 (GR340_03110) | - | 599196..599579 (-) | 384 | WP_060786370.1 | helix-turn-helix domain-containing protein | - |
| GR340_RS03170 (GR340_03115) | - | 599794..599997 (+) | 204 | WP_060786371.1 | hypothetical protein | - |
| GR340_RS03175 (GR340_03120) | - | 599994..600278 (+) | 285 | WP_002788580.1 | hypothetical protein | - |
| GR340_RS03180 (GR340_03125) | - | 600709..601440 (+) | 732 | WP_002801548.1 | phage regulatory protein/antirepressor Ant | - |
| GR340_RS03185 (GR340_03130) | - | 601493..601780 (+) | 288 | WP_002787279.1 | YopX family protein | - |
| GR340_RS03190 (GR340_03135) | - | 601837..602100 (+) | 264 | WP_002787281.1 | hypothetical protein | - |
| GR340_RS03195 (GR340_03140) | - | 602066..602296 (+) | 231 | WP_002787283.1 | hypothetical protein | - |
| GR340_RS03200 (GR340_03145) | - | 602434..603201 (+) | 768 | WP_277737532.1 | hypothetical protein | - |
| GR340_RS03205 (GR340_03150) | - | 603215..603451 (+) | 237 | WP_277737533.1 | transcriptional regulator | - |
| GR340_RS03210 (GR340_03155) | - | 603839..604159 (+) | 321 | WP_060786175.1 | hypothetical protein | - |
| GR340_RS03215 (GR340_03160) | - | 604238..604552 (+) | 315 | WP_060786176.1 | hypothetical protein | - |
| GR340_RS03220 (GR340_03165) | - | 604489..605250 (+) | 762 | WP_002869676.1 | hypothetical protein | - |
| GR340_RS03225 (GR340_03170) | - | 605259..605483 (+) | 225 | WP_011049924.1 | hypothetical protein | - |
| GR340_RS03235 (GR340_03175) | - | 605484..605854 (+) | 371 | Protein_621 | hypothetical protein | - |
| GR340_RS03240 (GR340_03180) | - | 605838..606104 (+) | 267 | WP_002787304.1 | hypothetical protein | - |
| GR340_RS03245 (GR340_03185) | - | 606082..606837 (+) | 756 | WP_250426837.1 | site-specific DNA-methyltransferase | - |
| GR340_RS03250 (GR340_03190) | - | 606855..607208 (+) | 354 | WP_052799158.1 | hypothetical protein | - |
| GR340_RS03255 (GR340_03195) | - | 607210..607416 (+) | 207 | WP_002787309.1 | helix-turn-helix domain-containing protein | - |
| GR340_RS03260 (GR340_03200) | - | 607413..608588 (-) | 1176 | WP_002787311.1 | site-specific integrase | - |
| GR340_RS03270 (GR340_03210) | - | 608923..610023 (-) | 1101 | WP_002780911.1 | FtsW/RodA/SpoVE family cell cycle protein | - |
| GR340_RS03275 (GR340_03215) | - | 610102..611067 (+) | 966 | WP_002784319.1 | RluA family pseudouridine synthase | - |
| GR340_RS03280 (GR340_03220) | - | 611015..612247 (+) | 1233 | WP_002780915.1 | fibronectin type III domain-containing protein | - |
| GR340_RS03285 (GR340_03225) | trmB | 612247..613443 (+) | 1197 | WP_002780917.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
| GR340_RS03290 (GR340_03230) | - | 613492..614157 (+) | 666 | WP_002784315.1 | ABC transporter ATP-binding protein | - |
| GR340_RS03295 (GR340_03235) | - | 614144..614950 (+) | 807 | WP_002799567.1 | FtsX-like permease family protein | - |
| GR340_RS03300 (GR340_03240) | - | 614947..616149 (+) | 1203 | WP_002811044.1 | M23 family metallopeptidase | - |
Sequence
Protein
Download Length: 217 a.a. Molecular weight: 25594.02 Da Isoelectric Point: 9.7448
>NTDB_id=411449 GR340_RS03145 WP_060786368.1 596768..597421(-) (CJE1441) [Campylobacter coli strain JZ_1_95]
MKKLILLPLLSTLAFADYNQYKPSEDFAKYFTKQNCSQVLDKFYYINYYDYNYKGTKAVAYKLEADNLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTISNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVALKLGSLEVL
NLVNYDSNPQRIKNNIAVPSSYVKILKGDNFKECYQVPNHEVDDESIRIYKVQCDNF
MKKLILLPLLSTLAFADYNQYKPSEDFAKYFTKQNCSQVLDKFYYINYYDYNYKGTKAVAYKLEADNLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTISNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVALKLGSLEVL
NLVNYDSNPQRIKNNIAVPSSYVKILKGDNFKECYQVPNHEVDDESIRIYKVQCDNF
Nucleotide
Download Length: 654 bp
>NTDB_id=411449 GR340_RS03145 WP_060786368.1 596768..597421(-) (CJE1441) [Campylobacter coli strain JZ_1_95]
ATAAAAAAACTCATACTTTTACCATTGTTATCCACTCTAGCCTTTGCTGATTATAATCAATACAAACCAAGTGAAGATTT
TGCCAAGTATTTTACTAAGCAAAACTGCTCACAAGTTTTAGATAAATTTTATTATATTAATTACTATGATTATAATTATA
AAGGCACTAAAGCTGTAGCTTATAAACTAGAAGCAGATAATCTAAAAGGCGAACAAATCAAAAAACGCCCACGCTTTGAA
GATGATACAAATATACCTAAAAAATACCGCACTACATGGAGTGATTATAAAAACAGCGGTTATGATAGAGGGCATACTAT
TTCTAATGCTTCAATGAGAAAAACAACTCAAGCTCAAAGAAGCACTTTTTTAATGAGCAATATTACTCCACAAAATCCAC
AAATCAATCAAAGGGTTTGGAACAAGATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAACTTGGAAGTTTAGAAGTTTTA
AATTTGGTTAATTATGATAGTAATCCACAAAGAATAAAAAACAATATAGCTGTGCCAAGCTCTTATGTTAAGATCTTAAA
AGGTGATAATTTTAAAGAATGTTATCAAGTGCCAAATCATGAAGTCGATGATGAGAGTATAAGAATATATAAGGTACAAT
GTGACAATTTTTAA
ATAAAAAAACTCATACTTTTACCATTGTTATCCACTCTAGCCTTTGCTGATTATAATCAATACAAACCAAGTGAAGATTT
TGCCAAGTATTTTACTAAGCAAAACTGCTCACAAGTTTTAGATAAATTTTATTATATTAATTACTATGATTATAATTATA
AAGGCACTAAAGCTGTAGCTTATAAACTAGAAGCAGATAATCTAAAAGGCGAACAAATCAAAAAACGCCCACGCTTTGAA
GATGATACAAATATACCTAAAAAATACCGCACTACATGGAGTGATTATAAAAACAGCGGTTATGATAGAGGGCATACTAT
TTCTAATGCTTCAATGAGAAAAACAACTCAAGCTCAAAGAAGCACTTTTTTAATGAGCAATATTACTCCACAAAATCCAC
AAATCAATCAAAGGGTTTGGAACAAGATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAACTTGGAAGTTTAGAAGTTTTA
AATTTGGTTAATTATGATAGTAATCCACAAAGAATAAAAAACAATATAGCTGTGCCAAGCTCTTATGTTAAGATCTTAAA
AGGTGATAATTTTAAAGAATGTTATCAAGTGCCAAATCATGAAGTCGATGATGAGAGTATAAGAATATATAAGGTACAAT
GTGACAATTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| CJE1441 | Campylobacter jejuni RM1221 |
92.166 |
100 |
0.922 |
| CJE0566 | Campylobacter jejuni RM1221 |
90.698 |
99.078 |
0.899 |