Detailed information
Bioinformatically predicted
Overview
| Name | pepF | Type | Regulator |
| Locus tag | SGPB_RS03040 | Genome accession | NC_015600 |
| Coordinates | 571403..573205 (+) | Length | 600 a.a. |
| NCBI ID | WP_013851608.1 | Uniprot ID | A0AAW6YFF3 |
| Organism | Streptococcus pasteurianus ATCC 43144 | ||
| Function | degradation of XIP; competence shut-off (predicted from homology) Competence regulation |
||
Genomic Context
Location: 566403..578205
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SGPB_RS03015 (SGPB_0546) | queA | 567060..568088 (-) | 1029 | WP_003063841.1 | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | - |
| SGPB_RS03020 (SGPB_0547) | - | 568264..568764 (+) | 501 | WP_003063844.1 | VIT1/CCC1 transporter family protein | - |
| SGPB_RS03025 (SGPB_0548) | nagB | 568892..569596 (+) | 705 | WP_013851605.1 | glucosamine-6-phosphate deaminase | - |
| SGPB_RS03030 (SGPB_0549) | - | 569672..570388 (+) | 717 | WP_013851606.1 | pseudouridine synthase | - |
| SGPB_RS03035 (SGPB_0550) | - | 570442..571413 (+) | 972 | WP_013851607.1 | competence protein CoiA | - |
| SGPB_RS03040 (SGPB_0551) | pepF | 571403..573205 (+) | 1803 | WP_013851608.1 | oligoendopeptidase F | Regulator |
| SGPB_RS03045 (SGPB_0552) | - | 573278..573796 (+) | 519 | WP_013851609.1 | GNAT family N-acetyltransferase | - |
| SGPB_RS03050 (SGPB_0553) | - | 573818..574429 (+) | 612 | WP_003063855.1 | HAD-IA family hydrolase | - |
| SGPB_RS03055 (SGPB_0554) | - | 574483..575184 (+) | 702 | WP_013851610.1 | O-methyltransferase | - |
| SGPB_RS03060 (SGPB_0555) | - | 575254..576291 (+) | 1038 | WP_013851611.1 | peptidyl-prolyl cis-trans isomerase | - |
Sequence
Protein
Download Length: 600 a.a. Molecular weight: 68935.96 Da Isoelectric Point: 4.5970
>NTDB_id=41072 SGPB_RS03040 WP_013851608.1 571403..573205(+) (pepF) [Streptococcus pasteurianus ATCC 43144]
MSDNRSHIDEKYQWDLSTVFATDDAWEAELASLDSDLENAKAYKGRLTASSNDLLAITESYLALSRRLEKLYVYASMKND
QDTTVAKYQEYQAKATAIYAKFSEIFAFYEPELMQLSKEAFEDFVAETPALSAYAHFFEQLFKRQPHVLSQAEEELLAGA
QEIFGAAGETFGLLDNADIIFPIVPDDEGKEIQLTHGNFISLLESKNRDVRKEAYQALYATYEQFQHTYAKTLQTNVKVH
NYEARVHHFKSAREAALSANFIPESVYDTLIETVNANLPLLHRYVELRKKILKLDDLKMYDIHTPLSEMDMSFTYEEALV
KAEDVLAVFGKEYSERVHRAFTERWIDVHVNKGKRSGAYSGGSYDTNAFMLLNWQDTLDNLFTLVHETGHSLHSTFTREN
QPYVYGDYSIFLAEIASTTNENILTETLLKEVDDDKARFAILNHYLDGFKSTIFRQAQFAEFEDIIHKADQAGEVLTSDY
LNQLYADLNEKYYGLSKTDNLEIQYEWARIPHFYYNYYVYQYATGFAAASYLADKVVHGTQADIDRYLDYLKAGNSDYPL
NVIKKAGVDMTTSAYLDAAFRIFEERLDELEALIEKGAHL
MSDNRSHIDEKYQWDLSTVFATDDAWEAELASLDSDLENAKAYKGRLTASSNDLLAITESYLALSRRLEKLYVYASMKND
QDTTVAKYQEYQAKATAIYAKFSEIFAFYEPELMQLSKEAFEDFVAETPALSAYAHFFEQLFKRQPHVLSQAEEELLAGA
QEIFGAAGETFGLLDNADIIFPIVPDDEGKEIQLTHGNFISLLESKNRDVRKEAYQALYATYEQFQHTYAKTLQTNVKVH
NYEARVHHFKSAREAALSANFIPESVYDTLIETVNANLPLLHRYVELRKKILKLDDLKMYDIHTPLSEMDMSFTYEEALV
KAEDVLAVFGKEYSERVHRAFTERWIDVHVNKGKRSGAYSGGSYDTNAFMLLNWQDTLDNLFTLVHETGHSLHSTFTREN
QPYVYGDYSIFLAEIASTTNENILTETLLKEVDDDKARFAILNHYLDGFKSTIFRQAQFAEFEDIIHKADQAGEVLTSDY
LNQLYADLNEKYYGLSKTDNLEIQYEWARIPHFYYNYYVYQYATGFAAASYLADKVVHGTQADIDRYLDYLKAGNSDYPL
NVIKKAGVDMTTSAYLDAAFRIFEERLDELEALIEKGAHL
Nucleotide
Download Length: 1803 bp
>NTDB_id=41072 SGPB_RS03040 WP_013851608.1 571403..573205(+) (pepF) [Streptococcus pasteurianus ATCC 43144]
ATGTCAGATAATCGTAGTCATATTGATGAAAAATACCAATGGGATTTAAGCACAGTTTTTGCTACAGATGATGCTTGGGA
AGCGGAGCTGGCTAGTCTTGATAGTGATTTAGAAAATGCTAAAGCTTACAAAGGACGTTTGACAGCGTCAAGTAATGATT
TGCTTGCTATTACGGAAAGTTACCTTGCCTTGTCGCGTCGTTTGGAGAAGCTTTATGTTTATGCTTCAATGAAAAACGAC
CAAGATACAACAGTAGCCAAATACCAAGAATACCAAGCTAAAGCAACAGCAATCTATGCCAAGTTTAGTGAAATTTTTGC
TTTTTACGAACCTGAATTGATGCAATTGTCTAAAGAAGCTTTTGAGGATTTCGTGGCAGAAACACCAGCTTTATCTGCTT
ATGCACATTTCTTTGAGCAACTTTTCAAACGTCAACCGCATGTTTTGTCACAGGCTGAGGAAGAATTATTAGCAGGTGCG
CAAGAAATTTTTGGAGCTGCAGGAGAAACATTTGGGCTTTTGGATAATGCTGACATCATTTTTCCAATCGTTCCAGATGA
TGAGGGCAAAGAAATTCAGCTAACGCATGGTAATTTCATTAGCTTGTTAGAATCAAAAAATCGTGATGTCCGCAAAGAAG
CTTACCAAGCTTTGTATGCAACTTATGAACAATTCCAACACACTTATGCGAAAACCTTGCAAACCAATGTCAAAGTGCAT
AACTATGAAGCGCGTGTTCATCATTTTAAATCAGCACGTGAGGCAGCACTTTCGGCTAATTTTATTCCAGAATCTGTTTA
TGATACCTTGATTGAAACGGTCAATGCTAACCTGCCTTTGCTTCATCGTTACGTGGAACTTCGCAAGAAAATCCTTAAAC
TGGATGATTTGAAAATGTACGATATTCATACGCCACTTTCTGAAATGGATATGAGTTTTACCTATGAAGAAGCTTTGGTA
AAAGCTGAAGATGTCTTGGCTGTTTTTGGCAAAGAATATTCTGAGCGTGTTCATCGTGCTTTTACAGAACGCTGGATTGA
CGTCCATGTCAATAAAGGCAAACGCTCTGGTGCCTACTCTGGTGGTTCGTATGATACGAATGCTTTCATGCTGTTAAATT
GGCAAGATACCTTGGATAATTTGTTTACCTTAGTTCACGAAACAGGGCACAGCTTGCATTCGACATTTACACGTGAAAAT
CAACCCTATGTTTATGGAGATTACAGTATTTTCTTGGCAGAAATTGCTTCAACAACTAATGAAAATATTTTGACAGAAAC
ACTTTTGAAAGAAGTTGATGATGACAAAGCACGCTTTGCAATTTTGAATCATTATCTTGATGGTTTCAAGAGTACCATTT
TCCGCCAAGCACAATTTGCGGAATTTGAAGATATCATTCATAAGGCAGACCAAGCTGGAGAAGTGTTGACGAGTGATTAC
CTCAACCAACTTTATGCCGACTTAAACGAGAAATATTATGGACTCAGCAAAACAGACAACCTAGAAATCCAATACGAATG
GGCACGCATTCCGCATTTCTACTACAATTACTATGTTTACCAATACGCCACAGGATTTGCGGCAGCTAGTTATTTAGCTG
ATAAGGTTGTTCACGGTACACAAGCTGATATTGACCGCTACCTTGATTATCTGAAAGCAGGTAATTCTGATTATCCGCTT
AATGTGATCAAAAAAGCTGGTGTGGATATGACAACAAGTGCTTATCTAGACGCTGCTTTCCGAATTTTTGAGGAACGCTT
GGATGAGTTGGAAGCTTTAATTGAAAAAGGAGCACATCTATAA
ATGTCAGATAATCGTAGTCATATTGATGAAAAATACCAATGGGATTTAAGCACAGTTTTTGCTACAGATGATGCTTGGGA
AGCGGAGCTGGCTAGTCTTGATAGTGATTTAGAAAATGCTAAAGCTTACAAAGGACGTTTGACAGCGTCAAGTAATGATT
TGCTTGCTATTACGGAAAGTTACCTTGCCTTGTCGCGTCGTTTGGAGAAGCTTTATGTTTATGCTTCAATGAAAAACGAC
CAAGATACAACAGTAGCCAAATACCAAGAATACCAAGCTAAAGCAACAGCAATCTATGCCAAGTTTAGTGAAATTTTTGC
TTTTTACGAACCTGAATTGATGCAATTGTCTAAAGAAGCTTTTGAGGATTTCGTGGCAGAAACACCAGCTTTATCTGCTT
ATGCACATTTCTTTGAGCAACTTTTCAAACGTCAACCGCATGTTTTGTCACAGGCTGAGGAAGAATTATTAGCAGGTGCG
CAAGAAATTTTTGGAGCTGCAGGAGAAACATTTGGGCTTTTGGATAATGCTGACATCATTTTTCCAATCGTTCCAGATGA
TGAGGGCAAAGAAATTCAGCTAACGCATGGTAATTTCATTAGCTTGTTAGAATCAAAAAATCGTGATGTCCGCAAAGAAG
CTTACCAAGCTTTGTATGCAACTTATGAACAATTCCAACACACTTATGCGAAAACCTTGCAAACCAATGTCAAAGTGCAT
AACTATGAAGCGCGTGTTCATCATTTTAAATCAGCACGTGAGGCAGCACTTTCGGCTAATTTTATTCCAGAATCTGTTTA
TGATACCTTGATTGAAACGGTCAATGCTAACCTGCCTTTGCTTCATCGTTACGTGGAACTTCGCAAGAAAATCCTTAAAC
TGGATGATTTGAAAATGTACGATATTCATACGCCACTTTCTGAAATGGATATGAGTTTTACCTATGAAGAAGCTTTGGTA
AAAGCTGAAGATGTCTTGGCTGTTTTTGGCAAAGAATATTCTGAGCGTGTTCATCGTGCTTTTACAGAACGCTGGATTGA
CGTCCATGTCAATAAAGGCAAACGCTCTGGTGCCTACTCTGGTGGTTCGTATGATACGAATGCTTTCATGCTGTTAAATT
GGCAAGATACCTTGGATAATTTGTTTACCTTAGTTCACGAAACAGGGCACAGCTTGCATTCGACATTTACACGTGAAAAT
CAACCCTATGTTTATGGAGATTACAGTATTTTCTTGGCAGAAATTGCTTCAACAACTAATGAAAATATTTTGACAGAAAC
ACTTTTGAAAGAAGTTGATGATGACAAAGCACGCTTTGCAATTTTGAATCATTATCTTGATGGTTTCAAGAGTACCATTT
TCCGCCAAGCACAATTTGCGGAATTTGAAGATATCATTCATAAGGCAGACCAAGCTGGAGAAGTGTTGACGAGTGATTAC
CTCAACCAACTTTATGCCGACTTAAACGAGAAATATTATGGACTCAGCAAAACAGACAACCTAGAAATCCAATACGAATG
GGCACGCATTCCGCATTTCTACTACAATTACTATGTTTACCAATACGCCACAGGATTTGCGGCAGCTAGTTATTTAGCTG
ATAAGGTTGTTCACGGTACACAAGCTGATATTGACCGCTACCTTGATTATCTGAAAGCAGGTAATTCTGATTATCCGCTT
AATGTGATCAAAAAAGCTGGTGTGGATATGACAACAAGTGCTTATCTAGACGCTGCTTTCCGAATTTTTGAGGAACGCTT
GGATGAGTTGGAAGCTTTAATTGAAAAAGGAGCACATCTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pepF | Streptococcus salivarius strain HSISS4 |
70.333 |
100 |
0.703 |