Detailed information NTG0410013

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: GQR98_RS06065
• Genome accession: NZ_CP047030
• Coordinates: 1448912..1449919 (+)
• Length: 335 a.a.
• NCBI ID: WP_159018721.1
• Uniprot ID: -
• Organism: Algibacter sp. L3A6
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1443912..1454919

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GQR98_RS06045	-	1445023..1445769 (-)	747	WP_159018717.1	hypothetical protein	-
GQR98_RS06050	-	1446155..1447126 (+)	972	WP_159018718.1	IS110 family transposase	-
GQR98_RS06055	-	1447175..1447879 (-)	705	WP_159018719.1	hypothetical protein	-
GQR98_RS06060	-	1448026..1448445 (-)	420	WP_159018720.1	hypothetical protein	-
GQR98_RS06065	recA	1448912..1449919 (+)	1008	WP_159018721.1	recombinase RecA	Machinery gene
GQR98_RS06070	-	1450080..1450487 (+)	408	WP_159018722.1	hypothetical protein	-
GQR98_RS06075	-	1450515..1451057 (+)	543	WP_159018723.1	RNA polymerase sigma factor	-
GQR98_RS06080	-	1451057..1452619 (+)	1563	WP_159018724.1	hypothetical protein	-
GQR98_RS06085	-	1452704..1453441 (-)	738	WP_159018725.1	lysophospholipid acyltransferase family protein	-
GQR98_RS06090	trpS	1453557..1454525 (+)	969	WP_159018726.1	tryptophan--tRNA ligase	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36157.49 Da
• Isoelectric Point: 5.8870

>NTDB_id=410013 GQR98_RS06065 WP_159018721.1 1448912..1449919(+) (recA) [Algibacter sp. L3A6]
MSSEKEAKLKALKLTLDKLDKAYGKGTVMKMSDAAIQDVEAIPSGSLGLDIALGVGGYPRGRVIEIYGPESSGKTTLTLH
AIAEAQKAGGIAAFIDAEHAFDRFYAANLGVDIDNLIISQPDNGEQALEIADNLIRSGAIDIVVIDSVAALTPKSEIEGE
MGDSKMGLHARLMSQALRKLTGSISKTNCTVIFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRRSTQIKNSNGDV
LGNKTRVKVVKNKVAPPFKMAEFDIMYGEGVSKVGEILDVAVEYEIVKKSGSWFSYEDTKLGQGRDAVKAIIKDNPELFD
ELEQKIKAAIKESLN

Nucleotide

• Length: 1008 bp

>NTDB_id=410013 GQR98_RS06065 WP_159018721.1 1448912..1449919(+) (recA) [Algibacter sp. L3A6]
ATGAGCAGCGAAAAAGAAGCGAAATTAAAAGCACTAAAACTTACTTTAGATAAACTAGATAAAGCCTACGGAAAAGGTAC
GGTAATGAAAATGAGCGATGCCGCTATTCAAGATGTTGAAGCTATTCCTTCAGGTTCTTTAGGTTTAGATATCGCCTTAG
GCGTTGGTGGATATCCACGTGGACGTGTTATTGAAATATACGGACCAGAATCGTCGGGTAAAACCACATTAACTTTACAC
GCTATTGCCGAAGCTCAAAAAGCTGGTGGAATTGCAGCTTTTATTGATGCAGAGCATGCTTTCGATCGTTTTTATGCCGC
AAACCTTGGTGTAGATATAGATAACCTAATTATTTCTCAACCAGATAATGGTGAGCAAGCATTAGAAATTGCCGATAATT
TAATTCGTTCTGGCGCTATCGATATTGTTGTTATCGATTCAGTTGCTGCATTAACGCCAAAAAGTGAAATTGAAGGCGAA
ATGGGAGATTCTAAAATGGGCTTACACGCACGTTTAATGTCTCAGGCTTTACGTAAACTTACAGGGTCTATTAGCAAAAC
AAACTGTACTGTAATATTTATTAACCAATTACGTGAAAAAATTGGTGTAATGTTCGGTAACCCAGAAACAACAACTGGTG
GTAACGCATTAAAATTCTACGCATCTGTACGTTTAGATATTCGTCGTTCTACCCAAATTAAGAATAGTAATGGTGATGTT
TTAGGTAACAAAACCAGAGTAAAAGTTGTAAAAAACAAAGTAGCTCCACCATTTAAAATGGCCGAATTCGATATTATGTA
CGGAGAAGGTGTAAGTAAAGTTGGTGAAATTCTTGATGTTGCTGTAGAGTACGAAATTGTAAAGAAAAGTGGTTCTTGGT
TTAGTTACGAAGATACTAAACTTGGGCAAGGTCGTGATGCTGTAAAAGCAATCATTAAAGACAACCCAGAGCTTTTTGAT
GAGTTAGAACAAAAAATAAAAGCAGCTATTAAAGAAAGCCTGAACTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (10-272)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	75.821	100	0.758
recA	Acinetobacter baylyi ADP1	64.22	97.612	0.627
recA	Acinetobacter baumannii D1279779	64.596	96.119	0.621
recA	Glaesserella parasuis strain SC1401	62.349	99.104	0.618
recA	Ralstonia pseudosolanacearum GMI1000	66.667	92.239	0.615
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.272	96.716	0.612
recA	Neisseria gonorrhoeae MS11	65.495	93.433	0.612
recA	Neisseria gonorrhoeae strain FA1090	65.495	93.433	0.612
recA	Neisseria gonorrhoeae MS11	65.495	93.433	0.612
recA	Helicobacter pylori strain NCTC11637	62.577	97.313	0.609
recA	Streptococcus mitis NCTC 12261	63.354	96.119	0.609
recA	Bacillus subtilis subsp. subtilis str. 168	64.038	94.627	0.606
recA	Helicobacter pylori 26695	62.27	97.313	0.606
recA	Lactococcus lactis subsp. cremoris KW2	62.848	96.418	0.606
recA	Streptococcus mitis SK321	63.043	96.119	0.606
recA	Streptococcus pyogenes NZ131	62.037	96.716	0.6
recA	Streptococcus pneumoniae D39	62.229	96.418	0.6
recA	Streptococcus pneumoniae TIGR4	62.229	96.418	0.6
recA	Streptococcus pneumoniae Rx1	62.229	96.418	0.6
recA	Streptococcus pneumoniae R6	62.229	96.418	0.6
recA	Vibrio cholerae strain A1552	61.491	96.119	0.591
recA	Vibrio cholerae O1 biovar El Tor strain E7946	61.491	96.119	0.591
recA	Latilactobacillus sakei subsp. sakei 23K	60.923	97.015	0.591
recA	Pseudomonas stutzeri DSM 10701	60.923	97.015	0.591
recA	Streptococcus mutans UA159	60.494	96.716	0.585
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	57.764	96.119	0.555