Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   GPZ88_RS09775 Genome accession   NZ_CP046919
Coordinates   1931163..1932935 (-) Length   590 a.a.
NCBI ID   WP_166044306.1    Uniprot ID   A0A6G8I2C9
Organism   Streptococcus ruminicola strain CNU_G2     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1926163..1937935
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GPZ88_RS09750 (GPZ88_09730) - 1926638..1927552 (+) 915 WP_074626696.1 LysR family transcriptional regulator -
  GPZ88_RS09755 (GPZ88_09735) - 1927619..1928464 (+) 846 WP_074626695.1 aldo/keto reductase -
  GPZ88_RS09760 (GPZ88_09740) - 1928509..1929735 (-) 1227 WP_166044300.1 sensor histidine kinase -
  GPZ88_RS09765 (GPZ88_09745) - 1929744..1930424 (-) 681 WP_166044302.1 response regulator transcription factor -
  GPZ88_RS09770 (GPZ88_09750) - 1930427..1931062 (-) 636 WP_166044304.1 GTP pyrophosphokinase -
  GPZ88_RS09775 (GPZ88_09755) rcrQ 1931163..1932935 (-) 1773 WP_166044306.1 ABC transporter ATP-binding protein Regulator
  GPZ88_RS09780 (GPZ88_09760) rcrP 1932925..1934739 (-) 1815 WP_166044308.1 ABC transporter ATP-binding protein Regulator
  GPZ88_RS09785 (GPZ88_09765) rcrR 1934743..1935183 (-) 441 WP_006531250.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  GPZ88_RS09790 (GPZ88_09770) - 1935327..1935737 (-) 411 WP_166044310.1 peptide deformylase -
  GPZ88_RS09795 (GPZ88_09775) - 1935734..1936243 (-) 510 WP_093814675.1 GNAT family N-acetyltransferase -
  GPZ88_RS09800 (GPZ88_09780) gdhA 1936400..1937749 (-) 1350 WP_074626687.1 NADP-specific glutamate dehydrogenase -

Sequence

Protein


Download         Length: 590 a.a.        Molecular weight: 65224.30 Da        Isoelectric Point: 4.9559

>NTDB_id=409458 GPZ88_RS09775 WP_166044306.1 1931163..1932935(-) (rcrQ) [Streptococcus ruminicola strain CNU_G2]
MENKKKVSFYGRMKPYIKGFQFPFILAVIGAIISATVTVIGPDKLKEITNTIMKGLTPTKMGTIPGVNLDKVGQIALTLA
ILYVISAVVGYIQNFTVATIVQRFSQRLRAAIQVKIDRVPLNYFDSHSQGDTLSRVTNDVDLLGQSLNQSLGTLVTSVVL
LIGSIFMMFHSNVSMALTAIGSVFIGFLLVVVIMGSSQPLFKRQQNNLAAVNGYVEEIYSGHNVVTSYNASEETSQAFKT
LNTNLYKSMWQSQFLSGIMMPLMIFIGNFGYVMVCVVGAVKVINGDITMGDVVAFMTYVRIFSQPLSQIAQAFTQMQSAT
AAMSRVFEFLEEDEMEDDSDKERQLTDVKGEVTFDNVFFGYSKDKTIIHDFSAVAKPGQKVAIVGPTGAGKTTIVNLLMK
FYEIDKGQIAIDGVDTRLMSREEVHDQFSMVLQDTWLFEGTIKENLIYNQENITDDQVVAAAKAVGVHHFIMTLPDGYDT
YLDDSVTLSIGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIKNADLILVMKD
GNIIEQGSHDELMTEGGFYADLYNSQFEVA

Nucleotide


Download         Length: 1773 bp        

>NTDB_id=409458 GPZ88_RS09775 WP_166044306.1 1931163..1932935(-) (rcrQ) [Streptococcus ruminicola strain CNU_G2]
ATGGAAAATAAGAAAAAAGTATCCTTCTATGGCAGAATGAAGCCATACATTAAAGGTTTCCAATTTCCATTTATCCTTGC
GGTAATTGGAGCCATAATCTCAGCGACTGTTACTGTTATCGGTCCTGATAAATTAAAAGAAATTACAAATACCATTATGA
AAGGCTTGACACCAACTAAAATGGGGACTATCCCTGGTGTTAACCTAGATAAGGTTGGACAAATTGCTTTAACCCTTGCC
ATTTTATATGTGATTTCTGCAGTTGTTGGTTACATTCAAAACTTTACAGTAGCTACCATTGTTCAACGTTTCTCTCAACG
TTTGCGTGCAGCTATCCAAGTTAAAATTGACCGTGTGCCGCTAAATTATTTTGACAGTCATTCACAAGGGGATACCCTTT
CTCGTGTAACAAATGACGTGGATTTACTTGGTCAATCTCTTAACCAAAGTTTGGGAACATTGGTCACTTCAGTAGTGCTT
TTGATTGGTTCGATTTTCATGATGTTCCATTCAAATGTCAGCATGGCGCTAACAGCAATTGGGTCAGTCTTTATCGGTTT
CTTGCTAGTTGTTGTGATTATGGGGTCATCTCAACCCTTGTTCAAACGCCAACAAAATAACTTGGCAGCTGTTAACGGTT
ATGTTGAAGAAATTTATTCTGGTCATAATGTGGTAACAAGCTACAACGCATCTGAAGAAACTAGTCAAGCATTTAAAACA
CTTAACACAAATCTTTACAAATCAATGTGGCAATCACAATTCTTATCAGGTATTATGATGCCGCTCATGATTTTCATTGG
TAACTTTGGTTATGTTATGGTCTGTGTGGTTGGTGCAGTTAAGGTGATTAATGGCGATATTACCATGGGTGATGTGGTTG
CCTTTATGACTTACGTGCGTATTTTCTCACAACCATTATCACAAATTGCCCAAGCCTTCACACAAATGCAATCAGCTACA
GCTGCCATGAGTCGTGTCTTTGAATTCCTTGAAGAAGATGAAATGGAAGACGATTCTGATAAAGAACGCCAATTGACAGA
TGTTAAAGGTGAAGTTACATTTGATAATGTCTTCTTTGGTTATTCTAAAGATAAAACCATTATCCATGATTTCTCTGCAG
TTGCAAAACCTGGTCAAAAGGTTGCTATCGTTGGTCCAACAGGTGCTGGTAAGACAACTATTGTTAACCTTCTTATGAAA
TTCTATGAAATTGATAAAGGTCAAATTGCTATCGATGGTGTTGACACACGTTTGATGTCACGAGAAGAAGTCCATGACCA
ATTCTCAATGGTGCTTCAGGACACTTGGCTCTTTGAAGGAACAATCAAAGAAAACTTGATTTACAACCAAGAAAATATCA
CTGATGACCAAGTAGTGGCAGCAGCTAAAGCAGTTGGTGTTCACCACTTTATCATGACGCTTCCTGATGGCTATGACACC
TATCTTGATGATTCTGTTACTCTTTCAATCGGTCAAAAACAACTCTTGACCATTGCGCGTGCCCTCTTGAAAGATGCTCC
GCTTCTTATTCTAGATGAAGCAACATCATCAGTCGATACACGTACAGAAGAGTTGATTCAAAAAGCCATGGATAAATTGA
TGGAAGGTCGCACATCATTTGTGATTGCCCACCGTTTATCAACGATCAAGAATGCTGATTTAATCCTTGTCATGAAAGAT
GGTAACATCATTGAACAAGGTAGTCATGATGAATTGATGACAGAAGGTGGCTTCTATGCTGACCTTTACAATTCACAATT
TGAAGTAGCCTAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(25-306)

ABC transporter (ABC_tran)

(370-516)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6G8I2C9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

72.297

100

0.725

Multiple sequence alignment