Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   GPZ88_RS04365 Genome accession   NZ_CP046919
Coordinates   866467..867249 (+) Length   260 a.a.
NCBI ID   WP_158914653.1    Uniprot ID   A0A6G8HZL4
Organism   Streptococcus ruminicola strain CNU_G2     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 861467..872249
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GPZ88_RS04355 (GPZ88_04315) rlmH 864449..864928 (-) 480 WP_039696083.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  GPZ88_RS04360 (GPZ88_04320) htrA 865144..866400 (+) 1257 WP_158914651.1 S1C family serine protease Regulator
  GPZ88_RS04365 (GPZ88_04325) spo0J 866467..867249 (+) 783 WP_158914653.1 ParB/RepB/Spo0J family partition protein Regulator
  GPZ88_RS04370 (GPZ88_04330) dnaA 867453..868808 (+) 1356 WP_039696081.1 chromosomal replication initiator protein DnaA -
  GPZ88_RS04375 (GPZ88_04335) dnaN 868967..870103 (+) 1137 WP_158914655.1 DNA polymerase III subunit beta -
  GPZ88_RS04380 (GPZ88_04340) - 870234..871118 (+) 885 WP_166043577.1 diacylglycerol/lipid kinase family protein -
  GPZ88_RS04385 (GPZ88_04345) - 871129..871320 (+) 192 WP_039696077.1 DUF951 domain-containing protein -

Sequence


Protein


Download         Length: 260 a.a.        Molecular weight: 29807.65 Da        Isoelectric Point: 9.6238

>NTDB_id=409422 GPZ88_RS04365 WP_158914653.1 866467..867249(+) (spo0J) [Streptococcus ruminicola strain CNU_G2]
MIETLNLIPIDDIAPNPYQPRLKFKPEELEELSRSIKANGLIQPIIVRKSDIFGYELIAGERRLKASKMAGLSEIPAIIK
DITNKESMQLAIVENLQRSDLNPIEEAKAYQQLLDKNQMTHEELAQFMGKSRPYITNCLRLLNLPTIISHAVEKGELSQG
HARVLLTLKDEKEQEKWYQKILSEDMSVRKLEQAVKSTKKKKTSPKVSKKDIFIRHQEEELSKLLGLPVTLSLSKSGFKG
DLQLHFQSEEDLNRIINRLK

Nucleotide


Download         Length: 783 bp        

>NTDB_id=409422 GPZ88_RS04365 WP_158914653.1 866467..867249(+) (spo0J) [Streptococcus ruminicola strain CNU_G2]
ATGATTGAAACACTTAATCTCATACCTATTGACGATATTGCACCAAATCCTTATCAACCTCGCTTGAAATTTAAGCCAGA
AGAATTAGAAGAACTTTCTCGCTCAATAAAGGCAAACGGCCTCATACAGCCGATAATCGTCCGTAAATCAGATATTTTTG
GTTACGAGCTCATTGCAGGCGAAAGACGTCTTAAAGCATCAAAAATGGCTGGTTTAAGCGAAATTCCTGCAATTATAAAA
GATATTACTAATAAAGAAAGCATGCAGCTTGCTATTGTTGAAAATTTGCAGCGCTCTGACCTCAATCCTATTGAAGAAGC
CAAGGCTTATCAGCAATTGCTCGATAAAAACCAAATGACTCACGAAGAGTTGGCACAATTTATGGGAAAATCACGACCAT
ATATCACTAATTGCTTGCGCTTATTGAATTTACCGACGATTATTTCTCATGCCGTCGAAAAAGGTGAACTTTCTCAAGGA
CACGCGCGTGTGCTACTGACACTTAAGGACGAAAAAGAGCAGGAGAAGTGGTACCAAAAAATTCTGAGCGAAGATATGAG
CGTTCGCAAACTCGAACAAGCTGTAAAATCTACTAAAAAGAAAAAAACATCTCCTAAAGTAAGCAAAAAAGATATTTTTA
TCCGTCATCAAGAAGAAGAATTATCAAAATTATTAGGTCTCCCCGTCACCTTATCACTTTCTAAAAGTGGCTTTAAAGGA
GACTTACAATTACATTTTCAATCAGAAGAAGACTTAAACAGAATTATCAACAGGCTAAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6G8HZL4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

61.004

99.615

0.608


Multiple sequence alignment