Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   GPY14_RS15585 Genome accession   NZ_CP046918
Coordinates   3267394..3268347 (+) Length   317 a.a.
NCBI ID   WP_158186003.1    Uniprot ID   -
Organism   Bacillus velezensis strain BA-26     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3262394..3273347
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GPY14_RS15560 (GPY14_15560) - 3262442..3263875 (+) 1434 WP_015416810.1 sensor histidine kinase -
  GPY14_RS15565 (GPY14_15565) rapC 3264028..3265176 (+) 1149 WP_033575082.1 Rap family tetratricopeptide repeat protein Regulator
  GPY14_RS15570 (GPY14_15570) phrC 3265160..3265279 (+) 120 WP_033575081.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  GPY14_RS15575 (GPY14_15575) - 3265426..3265536 (-) 111 WP_370529518.1 YjcZ family sporulation protein -
  GPY14_RS15580 (GPY14_15580) - 3265616..3266980 (-) 1365 WP_033575080.1 aspartate kinase -
  GPY14_RS15585 (GPY14_15585) ceuB 3267394..3268347 (+) 954 WP_158186003.1 ABC transporter permease Machinery gene
  GPY14_RS15590 (GPY14_15590) - 3268337..3269284 (+) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  GPY14_RS15595 (GPY14_15595) - 3269278..3270036 (+) 759 WP_003156330.1 ABC transporter ATP-binding protein -
  GPY14_RS15600 (GPY14_15600) - 3270058..3271002 (+) 945 WP_007410275.1 siderophore ABC transporter substrate-binding protein -
  GPY14_RS15605 (GPY14_15605) - 3271044..3272468 (-) 1425 WP_033575079.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34960.21 Da        Isoelectric Point: 9.6741

>NTDB_id=409375 GPY14_RS15585 WP_158186003.1 3267394..3268347(+) (ceuB) [Bacillus velezensis strain BA-26]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMQLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=409375 GPY14_RS15585 WP_158186003.1 3267394..3268347(+) (ceuB) [Bacillus velezensis strain BA-26]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCGGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGATTGGGCAAGGCTCGGAATCTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTTGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCGGGAAATTTTCTTTTCATGAAAATCCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAACATCGTCAGCTCAATCGCCACGTTTATCGCATATAAATATGACCTGATC
CAAAACCTGTCGTCTTGGCTGCAGGGAGATTTCTCACTGGTCGTCAAAGGCCGGTATGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTGTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATATAAACGCGTCGTTAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
CGCTCTGCTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGGATCTTCCTGTATATGCAGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.481

99.685

0.533

Multiple sequence alignment